Miyakogusa Predicted Gene
- Lj2g3v1058180.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1058180.1 tr|B9VJS8|B9VJS8_LOTJA Starch synthase IIa
OS=Lotus japonicus PE=2 SV=1,100,0,SSF53756,NULL;
Glycos_transf_1,Glycosyl transferase, family 1; PTHR12526:SF17,NULL;
glgA,Glycogen/st,CUFF.36102.1
(2382 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76460 similar to UniRef100_Q43093 Cluster: Granule-bo... 971 0.0
gnl|LJGI|AU251634 homologue to UniRef100_A7PMX5 Cluster: Chromos... 735 0.0
gnl|LJGI|TC69026 similar to UniRef100_A7PMX5 Cluster: Chromosome... 367 e-100
gnl|LJGI|FS321561 similar to UniRef100_A7PMX5 Cluster: Chromosom... 301 1e-80
>gnl|LJGI|TC76460 similar to UniRef100_Q43093 Cluster: Granule-bound starch synthase
2, chloroplast precursor; n=1; Pisum sativum|Rep:
Granule-bound starch synthase 2, chloroplast precursor -
Pisum sativum (Garden pea), partial (9%)
Length = 674
Score = 971 bits (490), Expect = 0.0
Identities = 490/490 (100%)
Strand = Plus / Plus
Query: 1 atggcatcactgagttcagctccatttctagtagaaacccatgctgacaccactgtgcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 atggcatcactgagttcagctccatttctagtagaaacccatgctgacaccactgtgcta 244
Query: 61 ctgcttcacactagcaacctcaaaatcccagtgaaattcagcaccataaatgcttcagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ctgcttcacactagcaacctcaaaatcccagtgaaattcagcaccataaatgcttcagtg 304
Query: 121 ttcaccagagggtttgatcgtggtagattgaagcataggtgtagcaggggtttactgtgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ttcaccagagggtttgatcgtggtagattgaagcataggtgtagcaggggtttactgtgt 364
Query: 181 ccatgggggactaagcacattagagctcttggtaaaagctctgggacaagtgaggaggac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ccatgggggactaagcacattagagctcttggtaaaagctctgggacaagtgaggaggac 424
Query: 241 aaggatgaatcagaggataggattaaagccaccattgcaaagggccaaaaggctcttgct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 aaggatgaatcagaggataggattaaagccaccattgcaaagggccaaaaggctcttgct 484
Query: 301 ttgcaaagggagcttcttcaacagatcgctgaaggaaagaaactggtttcttctataagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 ttgcaaagggagcttcttcaacagatcgctgaaggaaagaaactggtttcttctataagc 544
Query: 361 agtgagagcattcctgaaccagatgggaatagtgtttcttacgaacccagtggcaaatct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 agtgagagcattcctgaaccagatgggaatagtgtttcttacgaacccagtggcaaatct 604
Query: 421 ctgtcaagtgactcagatccacagaaagcttctgccagcagagacaagtcttttgaaaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 ctgtcaagtgactcagatccacagaaagcttctgccagcagagacaagtcttttgaaaat 664
Query: 481 caacgtggtg 490
||||||||||
Sbjct: 665 caacgtggtg 674
>gnl|LJGI|AU251634 homologue to UniRef100_A7PMX5 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 371
Score = 735 bits (371), Expect = 0.0
Identities = 371/371 (100%)
Strand = Plus / Plus
Query: 1783 caaaaagagcttggtttgcctgtccgcgaggatgttccgttaatcggcttcattggaagg 1842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caaaaagagcttggtttgcctgtccgcgaggatgttccgttaatcggcttcattggaagg 60
Query: 1843 cttgatcaccagaaaggcgttgatctcatagctgaagcaattccttggatgatggaccag 1902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cttgatcaccagaaaggcgttgatctcatagctgaagcaattccttggatgatggaccag 120
Query: 1903 gatgtgcaactaatcatgttaggaactggaaggccggacctagaacagatgcttaggcaa 1962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gatgtgcaactaatcatgttaggaactggaaggccggacctagaacagatgcttaggcaa 180
Query: 1963 tttgaaagccaacaccgcgacaaagtcagggggtgggtcggcttttcggtgaagacggct 2022
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tttgaaagccaacaccgcgacaaagtcagggggtgggtcggcttttcggtgaagacggct 240
Query: 2023 cacaggataacagcaggtgtagacatactgctcatgccatcgagatttgagccgtgcgga 2082
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cacaggataacagcaggtgtagacatactgctcatgccatcgagatttgagccgtgcgga 300
Query: 2083 ttgaatcaactctatgccatgaattacggaactgttcctgttgtgcacgcggttggcgga 2142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttgaatcaactctatgccatgaattacggaactgttcctgttgtgcacgcggttggcgga 360
Query: 2143 ctacgagatac 2153
|||||||||||
Sbjct: 361 ctacgagatac 371
>gnl|LJGI|TC69026 similar to UniRef100_A7PMX5 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 751
Score = 367 bits (185), Expect = e-100
Identities = 185/185 (100%)
Strand = Plus / Plus
Query: 2198 catttgatagtgcagaagctgataagttaatacacgcgttagggaactgcttatggacct 2257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 catttgatagtgcagaagctgataagttaatacacgcgttagggaactgcttatggacct 60
Query: 2258 acagggagtataagaagagctgggaagggcttcagaaacgagggatgtcgcaagatctta 2317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acagggagtataagaagagctgggaagggcttcagaaacgagggatgtcgcaagatctta 120
Query: 2318 gttgggacaatgcagctcagcagtatgaggaggttcttgttgctgccaaataccaatggt 2377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gttgggacaatgcagctcagcagtatgaggaggttcttgttgctgccaaataccaatggt 180
Query: 2378 gaatt 2382
|||||
Sbjct: 181 gaatt 185
>gnl|LJGI|FS321561 similar to UniRef100_A7PMX5 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 558
Score = 301 bits (152), Expect = 1e-80
Identities = 296/344 (86%)
Strand = Plus / Plus
Query: 2039 gtgtagacatactgctcatgccatcgagatttgagccgtgcggattgaatcaactctatg 2098
||||||||||| ||||||||||||| ||||||||||| || || ||||| ||||||||||
Sbjct: 1 gtgtagacatattgctcatgccatcaagatttgagccatgtgggttgaaccaactctatg 60
Query: 2099 ccatgaattacggaactgttcctgttgtgcacgcggttggcggactacgagataccgtgc 2158
|||||| ||| ||||| ||||||||||| || || ||||| ||| | ||||||| ||||
Sbjct: 61 ccatgagttatggaacagttcctgttgtacatgctgttggtggattgagagatactgtgc 120
Query: 2159 aggcttttaatccgtttgaagagtcagggcttgggtggacatttgatagtgcagaagctg 2218
|| ||||| |||| || | |||||||| ||||||||||| |||||||||||||| |||
Sbjct: 121 agccttttgatcctttcaatgagtcaggacttgggtggacttttgatagtgcagattctg 180
Query: 2219 ataagttaatacacgcgttagggaactgcttatggacctacagggagtataagaagagct 2278
|||||||||||| || |||||||| || |||| |||||| |||||| ||||||||||||
Sbjct: 181 gtaagttaatacatgcattagggaattgtttattgacctatagggagcataagaagagct 240
Query: 2279 gggaagggcttcagaaacgagggatgtcgcaagatcttagttgggacaatgcagctcagc 2338
|||||||| |||| | |||| ||| |||||||||||| ||||||||||| |||||||
Sbjct: 241 gggaagggattcaaaggagaggaatgatgcaagatcttagctgggacaatgctgctcagc 300
Query: 2339 agtatgaggaggttcttgttgctgccaaataccaatggtgaatt 2382
||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 301 tatatgaggaggtgcttgttgctgccaaataccaatggtgaatt 344