Miyakogusa Predicted Gene
- Lj2g3v1058040.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1058040.2 Non Chatacterized Hit- tr|I3S3D5|I3S3D5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.35,0,no
description,NULL; Trypsin_2,NULL; PDZ_2,PDZ domain; Domain present in
PSD-95, Dlg, and ZO-1/2.,PD,CUFF.36076.2
(1386 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59676 similar to UniRef100_A9RVV4 Cluster: Predicted ... 1136 0.0
gnl|LJGI|TC70462 weakly similar to UniRef100_A9RVV4 Cluster: Pre... 985 0.0
gnl|LJGI|AV418159 homologue to UniRef100_O82261 Cluster: Proteas... 64 2e-09
>gnl|LJGI|TC59676 similar to UniRef100_A9RVV4 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(24%)
Length = 758
Score = 1136 bits (573), Expect = 0.0
Identities = 576/577 (99%)
Strand = Plus / Plus
Query: 1 atgcaagtgtcagcatgcaatttgtggtctccgggagtgccacctcaggctcacagaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 atgcaagtgtcagcatgcaatttgtggtctccgggagtgccacctcaggctcacagaagc 241
Query: 61 actgttctcagccgccggaagatctgctttgatggcctatcctgtgtgtgccgctctcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 actgttctcagccgccggaagatctgctttgatggcctatcctgtgtgtgccgctctcac 301
Query: 121 tcccaacacttcccaaacgacaccgtttcctcccaacccatctccatttcaaggccagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tcccaacacttcccaaacgacaccgtttcctcccaacccatctccatttcaaggccagtt 361
Query: 181 caagatgaatcacaggattttgaagcaatgctgagtaaagaaattatgtccccgacacga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 caagatgaatcacaggattttgaagcaatgctgagtaaagaaattatgtccccgacacga 421
Query: 241 cgtgtgttaattgcgagcttgactatgttttcctgtttccaatcttcaaggtacttgtca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 cgtgtgttaattgcgagcttgactatgttttcctgtttccaatcttcaaggtacttgtca 481
Query: 301 gccttagcattgggagatccatcagtgacacttgaacaagtgactcctcctgtgtttcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gccttagcattgggagatccatcagtgacacttgaacaagtgactcctcctgtgtttcct 541
Query: 361 tctgggccactctttcctgcagaggatcgagttgttcaactatttgaaaggaacacgtac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tctgggccactctttcctgcagaggatcgagttgttcaactatttgaaaggaacacgtac 601
Query: 421 tctgttgttaacatcttcgatgtcacattgcgtcctcaacttaatgtgacaggtgtggtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 tctgttgttaacatcttcgatgtcacattgcgtcctcaacttaatgtgacaggtgtggtt 661
Query: 481 gagattcctgaaggaaatggttctggagtagtctgggatgacgagggccacattgtgaca 540
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 gagattcctgaacgaaatggttctggagtagtctgggatgacgagggccacattgtgaca 721
Query: 541 aattatcatgtaattggcaatgccctttcaagaaacc 577
|||||||||||||||||||||||||||||||||||||
Sbjct: 722 aattatcatgtaattggcaatgccctttcaagaaacc 758
>gnl|LJGI|TC70462 weakly similar to UniRef100_A9RVV4 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(38%)
Length = 661
Score = 985 bits (497), Expect = 0.0
Identities = 500/501 (99%)
Strand = Plus / Plus
Query: 886 gatgcagcaataaatcccgggaacagtggaggtcctctcctgaattcgaaaggaagctta 945
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gatgcagcagtaaatcccgggaacagtggaggtcctctcctgaattcgaaaggaagctta 60
Query: 946 attgggattaatactgcaatatttactcagacaggaacatcagctggtgttggatttgcc 1005
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attgggattaatactgcaatatttactcagacaggaacatcagctggtgttggatttgcc 120
Query: 1006 atcccatcttcgactgtacttcgaattgttcctcaattgattcaatatggaaaagttgtt 1065
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atcccatcttcgactgtacttcgaattgttcctcaattgattcaatatggaaaagttgtt 180
Query: 1066 agaggtggtttgaatgtggatattgctcctgacttagttgccaatcaacttaatgttcga 1125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agaggtggtttgaatgtggatattgctcctgacttagttgccaatcaacttaatgttcga 240
Query: 1126 aatggggctcttattcttcaggttcctgcaaatagtcctgctgccaaagctgggctaatt 1185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aatggggctcttattcttcaggttcctgcaaatagtcctgctgccaaagctgggctaatt 300
Query: 1186 cccacgacaaggggctttgccggtaatatagtccttggagatatcattgttgcagttgac 1245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cccacgacaaggggctttgccggtaatatagtccttggagatatcattgttgcagttgac 360
Query: 1246 aataaacctgtgaagagcaaagcagaattgttgaaagcattggatgactataatgtagga 1305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aataaacctgtgaagagcaaagcagaattgttgaaagcattggatgactataatgtagga 420
Query: 1306 gataaagtaatcttgctcattcagaggggtagtgaaaagttggaggtgcctatgctactt 1365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gataaagtaatcttgctcattcagaggggtagtgaaaagttggaggtgcctatgctactt 480
Query: 1366 gaggaacaaaaatcttgagag 1386
|||||||||||||||||||||
Sbjct: 481 gaggaacaaaaatcttgagag 501
>gnl|LJGI|AV418159 homologue to UniRef100_O82261 Cluster: Protease Do-like 2,
chloroplast precursor; n=1; Arabidopsis thaliana|Rep:
Protease Do-like 2, chloroplast precursor - Arabidopsis
thaliana (Mouse-ear cress), partial (15%)
Length = 282
Score = 63.9 bits (32), Expect = 2e-09
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 877 attcaaactgatgcagcaataaatcccgggaacagtggaggtcc 920
||||||| ||||||||||||||||||||| || |||||||||||
Sbjct: 96 attcaaattgatgcagcaataaatcccggtaatagtggaggtcc 139