Miyakogusa Predicted Gene
- Lj2g3v1055960.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1055960.1 Non Chatacterized Hit- tr|I1LWJ6|I1LWJ6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.49234 PE,95.53,0,P-loop
containing nucleoside triphosphate hydrolases,NULL; ABC transporter
transmembrane region,ABC ,CUFF.36095.1
(3759 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP039737 homologue to UniRef100_A7PMS6 Cluster: Chromos... 1003 0.0
gnl|LJGI|AV777565 homologue to UniRef100_A7PMS6 Cluster: Chromos... 270 6e-71
gnl|LJGI|BP055390 similar to UniRef100_A7QER8 Cluster: Chromosom... 56 2e-06
gnl|LJGI|TC77935 similar to UniRef100_A7Q0Z8 Cluster: Chromosome... 54 7e-06
>gnl|LJGI|BP039737 homologue to UniRef100_A7PMS6 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 528
Score = 1003 bits (506), Expect = 0.0
Identities = 513/514 (99%), Gaps = 1/514 (0%)
Strand = Plus / Plus
Query: 688 gccattgctcaagttcgaactgtttattcttatgttggtgagagcaaggcactgaattct 747
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 16 gccattgctcaagttcgaac-gtttattcttatgttggtgagagcaaggcactgaattct 74
Query: 748 tattctgatgcaattcaaaatacactgaaacttggatacaaggctggaatggctaaaggt 807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 tattctgatgcaattcaaaatacactgaaacttggatacaaggctggaatggctaaaggt 134
Query: 808 ttgggcctaggatgcacatatgggatagcttgcatgtcctgggcactagttttttggtat 867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 ttgggcctaggatgcacatatgggatagcttgcatgtcctgggcactagttttttggtat 194
Query: 868 gctggagtttttatcaggaatggacaaacagatggaggcaaagcattcacagctattttc 927
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 gctggagtttttatcaggaatggacaaacagatggaggcaaagcattcacagctattttc 254
Query: 928 tctgctattgttggtggaatgagtctgggtcagtcattttcaaatttaggtgctttcagc 987
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 tctgctattgttggtggaatgagtctgggtcagtcattttcaaatttaggtgctttcagc 314
Query: 988 aaaggcaaagctgctggatacaagttgatggagatcatcaagcagaaacccaccataatt 1047
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 aaaggcaaagctgctggatacaagttgatggagatcatcaagcagaaacccaccataatt 374
Query: 1048 gaagatctatcagatggaaagtgcttggatgaggttaatggcaacattgaatttaaggat 1107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 gaagatctatcagatggaaagtgcttggatgaggttaatggcaacattgaatttaaggat 434
Query: 1108 gttactttcagctacccgtcaaggccggatgtgattatcttccgcaatttctcgatcttt 1167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gttactttcagctacccgtcaaggccggatgtgattatcttccgcaatttctcgatcttt 494
Query: 1168 ttccctgctggaaaaactgttgcggttgttggtg 1201
||||||||||||||||||||||||||||||||||
Sbjct: 495 ttccctgctggaaaaactgttgcggttgttggtg 528
>gnl|LJGI|AV777565 homologue to UniRef100_A7PMS6 Cluster: Chromosome chr14
scaffold_21, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_21, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (3%)
Length = 308
Score = 270 bits (136), Expect = 6e-71
Identities = 136/136 (100%)
Strand = Plus / Minus
Query: 1 atggctgaagctgctgagcccaacaaggcatcatcattgcctgaagcagagaagaagaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 atggctgaagctgctgagcccaacaaggcatcatcattgcctgaagcagagaagaagaag 77
Query: 61 gaacagagcttacccttttaccagctcttctcatttgctgataaatatgattacatgctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 gaacagagcttacccttttaccagctcttctcatttgctgataaatatgattacatgctc 17
Query: 121 atgatctctggaagca 136
||||||||||||||||
Sbjct: 16 atgatctctggaagca 1
>gnl|LJGI|BP055390 similar to UniRef100_A7QER8 Cluster: Chromosome chr16 scaffold_86,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_86, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 473
Score = 56.0 bits (28), Expect = 2e-06
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 1507 caattatccgggggccaaaaacagagaattgcaatagccagagc 1550
|||||||| ||||| || |||||||||||||||||||| |||||
Sbjct: 228 caattatcagggggtcagaaacagagaattgcaatagcaagagc 271
>gnl|LJGI|TC77935 similar to UniRef100_A7Q0Z8 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 712
Score = 54.0 bits (27), Expect = 7e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 3517 gatgaggccacaagtgcacttgacgctgaatcaga 3551
|||||||||||||||||||| |||||||| |||||
Sbjct: 179 gatgaggccacaagtgcactagacgctgagtcaga 213