Miyakogusa Predicted Gene
- Lj2g3v1035900.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1035900.1 tr|A9SZD0|A9SZD0_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_167257,30.17,0.0000001,Glutaredoxin,Glutaredoxin;
GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN 1,NULL;
GLUTAREDOXIN,CUFF.36068.1
(1093 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76902 similar to UniRef100_Q2HVR5 Cluster: Thioredoxi... 916 0.0
gnl|LJGI|FS337878 similar to UniRef100_Q2HVR5 Cluster: Thioredox... 88 1e-16
gnl|LJGI|DC594749 similar to UniRef100_A7Q0A9 Cluster: Chromosom... 78 1e-13
gnl|LJGI|TC79802 similar to UniRef100_UPI0000502353 Cluster: Pro... 68 1e-10
>gnl|LJGI|TC76902 similar to UniRef100_Q2HVR5 Cluster: Thioredoxin fold; n=1; Medicago
truncatula|Rep: Thioredoxin fold - Medicago truncatula
(Barrel medic), partial (37%)
Length = 1148
Score = 916 bits (462), Expect = 0.0
Identities = 546/575 (94%), Gaps = 8/575 (1%)
Strand = Plus / Plus
Query: 451 agaaccaatggccatgttgatccagcacaactcaaggctagtttcattgaggaggggtca 510
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 127 agaaccaatggccatgttgatccagcacaactcaaagctagtttcattgaggaggggtca 186
Query: 511 aatctcaaggatgaagtttcagactttgatgatgaccctcaagtggtttcatcattccag 570
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 aatctcaaggctgaagtttcagactttgatgatgaccctcaagtggtttcatcattccag 246
Query: 571 aagtcattgcaagagaaaaaggagagcatggctaaaacgagattcttcccttttgaggaa 630
||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 247 aagacattgcaagagaaaaaggagagcatggctaaaacgagattcttctcttttgaggaa 306
Query: 631 aagaaaatcaattctggtgataaggtggt--------gttatatttcacaagcctgcgtg 682
|||||||||||||||||||| |||||||| ||| ||||||||||||||| | |
Sbjct: 307 aagaaaatcaattctggtgacaaggtggtcccgtggtgttgtatttcacaagcctgagag 366
Query: 683 gcgtgagaaagacttatgaggattgctgcaatgtgaggctgattctgaaaggattgggct 742
| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 367 gggtgagaaagacttatgaggattgctgcaatgtgtggctgattctgaaaggattgggct 426
Query: 743 tcaaggtggatgagagagatgtgtcaatgcatttggggttcaaggaggagcttagagagc 802
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ttaaggtggatgagagagatgtgtcaatgcatttggggttcaaggaggagcttagagagc 486
Query: 803 tactcattgatgggtttggaggattgccaagggtgtttgttgggagaaaatacattggtg 862
|||| | |||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 487 tactaactgatgggtttggaggatttccaagggtgtttgttgggaggaaatacattggtg 546
Query: 863 gagctgaggagattcagaagcttcatgaggatgggaaattggagaaattgcttgattgtt 922
||||||||||||||||||||||||||||||||||| || | |||||| ||||| ||||||
Sbjct: 547 gagctgaggagattcagaagcttcatgaggatggggaacttgagaaactgctttattgtt 606
Query: 923 gtgagaggattgatgatcacaatgatgtatgtgatggatgtggggatataaggtttgtgc 982
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 607 gtgagaggattgatgatcacaatgatgtatgggatggatgtggggatataaggtttgtgc 666
Query: 983 cttgtgaaacctgttctggaagttgtaaaatctac 1017
|||||||||||||||||||||||||||||||||||
Sbjct: 667 cttgtgaaacctgttctggaagttgtaaaatctac 701
Score = 99.6 bits (50), Expect = 4e-20
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 1018 cacaacgccccaccacggcaccaccggcaccgacaccaacatcgtccatctctgctgctg 1077
|||||||| ||||||||||||||||||||||||| || ||| ||||||||||||||||||
Sbjct: 63 cacaacgcaccaccacggcaccaccggcaccgacgccgacaccgtccatctctgctgctg 122
Query: 1078 ttgaag 1083
||||||
Sbjct: 123 ttgaag 128
>gnl|LJGI|FS337878 similar to UniRef100_Q2HVR5 Cluster: Thioredoxin fold; n=1;
Medicago truncatula|Rep: Thioredoxin fold - Medicago
truncatula (Barrel medic), partial (31%)
Length = 851
Score = 87.7 bits (44), Expect = 1e-16
Identities = 103/122 (84%), Gaps = 3/122 (2%)
Strand = Plus / Plus
Query: 325 ccaatcacaacaccaccttgtgagccagagactatcaacacatgggaattaatggaagga 384
||||||| |||||| ||| |||| ||||| || ||||| ||||||||||| ||||||||
Sbjct: 664 ccaatcagaacaccccctggtgaaccagaaacaatcaatacatgggaattgatggaaggt 723
Query: 385 cttgaagacacaggccctttattgagatcaccagttcacttcaggagcttctcttttgat 444
|||||||| | ||||| || ||||||||| |||||||||||||||||||||||||
Sbjct: 724 cttgaagatattagccct---ttcagatcaccaaatcacttcaggagcttctcttttgat 780
Query: 445 gt 446
||
Sbjct: 781 gt 782
Score = 83.8 bits (42), Expect = 2e-15
Identities = 75/86 (87%)
Strand = Plus / Plus
Query: 67 agaagctattcgatgcatgttcatcacccacctcaaagcaaaggggacacttaccatgtt 126
|||||||| || ||||| ||||||||||| |||||| | ||||||| | |||||||||
Sbjct: 280 agaagctactcaatgcacgttcatcaccctgctcaaaccgaaggggaaagctaccatgtt 339
Query: 127 gtggcactcacatcaaccacattagg 152
||||||||||| ||||||||||||||
Sbjct: 340 gtggcactcacctcaaccacattagg 365
>gnl|LJGI|DC594749 similar to UniRef100_A7Q0A9 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 477
Score = 77.8 bits (39), Expect = 1e-13
Identities = 59/66 (89%), Gaps = 6/66 (9%)
Strand = Plus / Plus
Query: 1018 cacaacgccccaccacggcaccaccggcaccgacaccaacatcgtccatctctgctgctg 1077
|||||||| ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 211 cacaacgcaccaccacggcaccaccggcaccgacac------cgtccatctctgctgctg 264
Query: 1078 ttgaag 1083
||||||
Sbjct: 265 ttgaag 270
>gnl|LJGI|TC79802 similar to UniRef100_UPI0000502353 Cluster: Protein NDRG4 (Brain
development-related molecule 1).; n=1; Rattus
norvegicus|Rep: Protein NDRG4 (Brain development-related
molecule 1). - Rattus norvegicus, partial (4%)
Length = 474
Score = 67.9 bits (34), Expect = 1e-10
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 1060 cgtccatctctgctgctgttgaaggttagttagg 1093
||||||||||||||||||||||||||||||||||
Sbjct: 106 cgtccatctctgctgctgttgaaggttagttagg 139