Miyakogusa Predicted Gene
- Lj2g3v1034750.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1034750.1 tr|G7IZD1|G7IZD1_MEDTR Cc-nbs-lrr resistance
protein OS=Medicago truncatula GN=MTR_3g026660 PE=4
SV=,64.05,0,DISEASERSIST,Disease resistance protein; seg,NULL; P-loop
containing nucleoside triphosphate hydrola,CUFF.36089.1
(3059 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS347544 similar to UniRef100_A7R019 Cluster: Chromosom... 117 4e-25
gnl|LJGI|AV777489 weakly similar to UniRef100_A4GN92 Cluster: RB... 113 7e-24
gnl|LJGI|BP063299 weakly similar to UniRef100_A7PYR0 Cluster: Ch... 72 2e-11
>gnl|LJGI|FS347544 similar to UniRef100_A7R019 Cluster: Chromosome undetermined
scaffold_295, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_295, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(3%)
Length = 689
Score = 117 bits (59), Expect = 4e-25
Identities = 140/167 (83%)
Strand = Plus / Minus
Query: 2641 ttacatgaggctttacagcatgtgactgccctgaaaaccttagtattgtgtaatcttcca 2700
||||||||||||||||| || ||||| | ||| || ||||| | ||| ||||||||||
Sbjct: 664 ttacatgaggctttacaacacatgactacactgcaatccttaacactgtctaatcttcca 605
Query: 2701 aacctagaatgcctgcctgcctacttgggaaaccttggctcgcttcaattattagctatt 2760
||| |||||| ||||||||||||||||||||||||||||||||||| | ||| | |||
Sbjct: 604 aacttagaatctctgcctgcctacttgggaaaccttggctcgcttcagtcattgaccatt 545
Query: 2761 tctaagtgccccaagttgacgtgtattcgcatgagtatccaatccct 2807
||| ||||||||||||| | |||| ||| ||||| || ||||||||
Sbjct: 544 tctgagtgccccaagttaatgtgtcttccaatgagcattcaatccct 498
>gnl|LJGI|AV777489 weakly similar to UniRef100_A4GN92 Cluster: RB; n=1; Solanum
verrucosum|Rep: RB - Solanum verrucosum, partial (6%)
Length = 451
Score = 113 bits (57), Expect = 7e-24
Identities = 99/113 (87%)
Strand = Plus / Plus
Query: 1 atgaagaggataagtgagaggttagatgaaatttctgaagagaggagtaagtttcatttg 60
||||||| |||||| ||||| ||||||||| || || ||||||||| || |||||||||
Sbjct: 334 atgaagatgataagggagagattagatgaagttgctcaagagaggactaggtttcattta 393
Query: 61 actgagatggttacccagaaaagagctgagtggcgccaaaccacctccatcat 113
|||||||||| ||| || ||||||||||| ||||||||||||||||| |||||
Sbjct: 394 actgagatggctacacaaaaaagagctgattggcgccaaaccacctcaatcat 446
>gnl|LJGI|BP063299 weakly similar to UniRef100_A7PYR0 Cluster: Chromosome chr12
scaffold_38, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_38, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (8%)
Length = 580
Score = 71.9 bits (36), Expect = 2e-11
Identities = 78/92 (84%)
Strand = Plus / Plus
Query: 670 cgtgcagagcttgtgggcataggaaaggagatagtaaagaagtgtgggggagtgcctctt 729
|||||||||||||| | ||||| |||||||| || || |||||||||||| | ||||||
Sbjct: 189 cgtgcagagcttgtagctataggcaaggagattgtgaaaaagtgtgggggattacctctt 248
Query: 730 gcagcaatagcactaggaagtcttttgcgctt 761
|||||| |||| ||||| |||| ||||||||
Sbjct: 249 gcagcacgagcattaggaggtctcttgcgctt 280