Miyakogusa Predicted Gene
- Lj2g3v1034670.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1034670.1 tr|G7L6Z5|G7L6Z5_MEDTR F-box family protein
OS=Medicago truncatula GN=MTR_8g044020 PE=4
SV=1,58.06,8e-18,GPROTEINBRPT,G-protein beta WD-40 repeat; seg,NULL;
WD_REPEATS_1,WD40 repeat, conserved site; WD40 r,CUFF.36063.1
(1311 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC77812 similar to UniRef100_A7PMN9 Cluster: Chromosome... 1168 0.0
gnl|LJGI|FS354101 similar to UniRef100_A7PMN9 Cluster: Chromosom... 751 0.0
gnl|LJGI|TC66472 similar to UniRef100_A7PMN9 Cluster: Chromosome... 737 0.0
gnl|LJGI|TC60774 149 5e-35
>gnl|LJGI|TC77812 similar to UniRef100_A7PMN9 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 811
Score = 1168 bits (589), Expect = 0.0
Identities = 608/615 (98%), Gaps = 7/615 (1%)
Strand = Plus / Plus
Query: 1 atgacctccaccgtactcaagcgcgtcgcctattccgatttcatctggcaacgcttcttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 atgacctccaccgtactcaagcgcgtcgcctattccgatttcatctggcaacgcttcttc 263
Query: 61 acggagcgttggcatcaagaaatacctcgcgcttcttcttcttcttcgcagcagcatcgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 acggagcgttggcatcaagaaatacctcgcgcttcttcttcttcttcgcagcagcatcgg 323
Query: 121 agtcgaagggaactgtacgtggctaggtacacagactcgcagcagttcaagttcttcgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agtcgaagggaactgtacgtggctaggtacacagactcgcagcagttcaagttcttcgac 383
Query: 181 cctttaggtctcgacgttcttttagaaccaaaacgtttcacacagttgctcctccatgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cctttaggtctcgacgttcttttagaaccaaaacgtttcacacagttgctcctccatgaa 443
Query: 241 aaccacgcttactccgcgcagggctcagttgtagaaatggtaaatttggatgcgtatcaa 300
||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 444 aaccacgcttactccgcgcag-------ttgtagaaatggtaaatttggatgcgtatcaa 496
Query: 301 gaggaattgggactcgctattcgtacattaagtgatcatagagcaagaatcacctgtatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 gaggaattgggactcgctattcgtacattaagtgatcatagagcaagaatcacctgtatg 556
Query: 361 aggttgttttcccacgatgatatgtctctgtgtcgaggtgaaacacaaggggagcaaaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 aggttgttttcccacgatgatatgtctctgtgtcgaggtgaaacacaaggggagcaaaat 616
Query: 421 gttttggttacctcaagctgtgatcactccattcgtctgtggtggaagggttcttgcctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gttttggttacctcaagctgtgatcactccattcgtctgtggtggaagggttcttgcctg 676
Query: 481 cgatgcttgagaggtcataacggtccagtattgtcactttcaaatgaattgttgggagag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 cgatgcttgagaggtcataacggtccagtattgtcactttcaaatgaattgttgggagag 736
Query: 541 ggtagcagcaaagtattggctagtggaggggaagatagtactgttcgactatggtccctt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 ggtagcagcaaagtattggctagtggaggggaagatagtactgttcgactatggtccctt 796
Query: 601 ggttcaagtggcgaa 615
|||||||||||||||
Sbjct: 797 ggttcaagtggcgaa 811
>gnl|LJGI|FS354101 similar to UniRef100_A7PMN9 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 864
Score = 751 bits (379), Expect = 0.0
Identities = 379/379 (100%)
Strand = Plus / Minus
Query: 686 ggcacaaaacatcgcttttggtgagcatgtcaagagattctaaggtacgggtttgggata 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ggcacaaaacatcgcttttggtgagcatgtcaagagattctaaggtacgggtttgggata 320
Query: 746 cagctacatcatcatcttcttgtgtggggacttctttttctggtgcacctgtaaacatga 805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 cagctacatcatcatcttcttgtgtggggacttctttttctggtgcacctgtaaacatga 260
Query: 806 aatgccatgaatcactgttgtatgtggcagctggttcctctgtcactgctgttgatttaa 865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 aatgccatgaatcactgttgtatgtggcagctggttcctctgtcactgctgttgatttaa 200
Query: 866 ggacaatgcacaaagtcatcaccatagctgtgcatccatcaaagctgtattcatttgacg 925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 ggacaatgcacaaagtcatcaccatagctgtgcatccatcaaagctgtattcatttgacg 140
Query: 926 ctttcccttcaaaatatttaatatgcactggcagtgatgacagagcaatgctctgggata 985
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 ctttcccttcaaaatatttaatatgcactggcagtgatgacagagcaatgctctgggata 80
Query: 986 ttaggagaaatcaagaaccagtaaaaccagaactgatatccgagttgggtggacatcgtg 1045
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 ttaggagaaatcaagaaccagtaaaaccagaactgatatccgagttgggtggacatcgtg 20
Query: 1046 ggccagtaacttgcttaca 1064
|||||||||||||||||||
Sbjct: 19 ggccagtaacttgcttaca 1
>gnl|LJGI|TC66472 similar to UniRef100_A7PMN9 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 909
Score = 737 bits (372), Expect = 0.0
Identities = 610/687 (88%), Gaps = 3/687 (0%)
Strand = Plus / Plus
Query: 1 atgacctccaccgtactcaagcgcgtcgcctattccgatttcatctggcaacgcttcttc 60
||||||||||| | ||||| ||| ||||||||||||||| ||| |||||||||||||||
Sbjct: 159 atgacctccactgccctcaaccgcctcgcctattccgattccatttggcaacgcttcttc 218
Query: 61 acggagcgttggcatcaagaaatacctcgcgcttcttcttcttcttcgcagcagcatcgg 120
|||||||| ||||| || |||||||||||||| ||| |||| || | || | | ||
Sbjct: 219 acggagcgctggcagcatgaaatacctcgcgcctctccttcgcattgg-agtggaaatgg 277
Query: 121 agtcgaagggaactgtacgtggctaggtacacagactcgcagcagttcaagttcttcgac 180
|| | |||||||||||| |||||||| |||| || | ||| |||||||||||||| |||
Sbjct: 278 agcc--agggaactgtacctggctaggcacaccgagttgcaacagttcaagttctttgac 335
Query: 181 cctttaggtctcgacgttcttttagaaccaaaacgtttcacacagttgctcctccatgaa 240
||||| ||||||| ||| || ||||||||| |||||||||||||||||||||||||
Sbjct: 336 cctttcattctcgacattcacttgcaaccaaaacctttcacacagttgctcctccatgaa 395
Query: 241 aaccacgcttactccgcgcagggctcagttgtagaaatggtaaatttggatgcgtatcaa 300
||| | |||||||||| |||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 396 aactatgcttactccgtgcagggctcagttgtagaaatgataaatttggatgcctatcaa 455
Query: 301 gaggaattgggactcgctattcgtacattaagtgatcatagagcaagaatcacctgtatg 360
|| || | || |||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 456 aagagatcgagagacgctattcagacattaagtgatcataaagcaagaatcacctgtatg 515
Query: 361 aggttgttttcccacgatgatatgtctctgtgtcgaggtgaaacacaaggggagcaaaat 420
||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 516 aggttgttttcccacaatgaaatgtcttcgtgtcgaggtgaaacacaaggggagcaaaat 575
Query: 421 gttttggttacctcaagctgtgatcactccattcgtctgtggtggaagggttcttgcctg 480
|||||||| || |||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 576 gttttggtcacttcaagctgtgatcactccattcgtctgtggaggaagggttcttgcctg 635
Query: 481 cgatgcttgagaggtcataacggtccagtattgtcactttcaaatgaattgttgggagag 540
||||||||||||||||| ||||||||||| |||||||| |||||| |||| |||||||||
Sbjct: 636 cgatgcttgagaggtcacaacggtccagtgttgtcactgtcaaataaattattgggagag 695
Query: 541 ggtagcagcaaagtattggctagtggaggggaagatagtactgttcgactatggtccctt 600
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 696 ggtagcagcaaagtattggctagtggaggggaagatagtactgttcgactgtggtccctt 755
Query: 601 ggttcaagtggcgaacgaggaaagcatgctctgaaggctacactctatgggcatgtaaaa 660
|||||||||||| |||||||| |||||||||| ||||||||| |||||||||||| ||||
Sbjct: 756 ggttcaagtggcaaacgaggacagcatgctctaaaggctacattctatgggcatgaaaaa 815
Query: 661 cctgtaaattttttgtcagttgccggg 687
||||||||||||||||||||||||
Sbjct: 816 ggcgtaaattttttgtcagttgccggg 842
>gnl|LJGI|TC60774
Length = 805
Score = 149 bits (75), Expect = 5e-35
Identities = 132/151 (87%)
Strand = Plus / Plus
Query: 942 tttaatatgcactggcagtgatgacagagcaatgctctgggatattaggagaaatcaaga 1001
||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttaatatgcactggaggttatggcagagcaatgctctgggatattaggagaaatcaaga 60
Query: 1002 accagtaaaaccagaactgatatccgagttgggtggacatcgtgggccagtaacttgctt 1061
| ||| ||||||||| | |||| | ||||||| ||| ||| |||||||||||| ||
Sbjct: 61 atcagcaaaaccagatccgataacagagttggatgggcatgacgggccagtaactatgtt 120
Query: 1062 acacatggatccatacaaaatcattactggg 1092
|||||||||||||||||||||| ||||||||
Sbjct: 121 acacatggatccatacaaaatcgttactggg 151
Score = 65.9 bits (33), Expect = 6e-10
Identities = 84/101 (83%)
Strand = Plus / Plus
Query: 1188 tgatgcaatggctgtagatggttgtagaattatcactgctagctattgtagaaatttggg 1247
|||||| |||||| ||||||| |||||| |||||||||| |||||||| | || |||
Sbjct: 250 tgatgccatggctatagatggctgtagagctatcactgcttgctattgtgaagatcgggg 309
Query: 1248 tattttgcgtttcagggacttcaacaatgctacaaaacctt 1288
| ||||||| || ||||||||||| | |||||||||||||
Sbjct: 310 tcttttgcgcttttgggacttcaacgacgctacaaaacctt 350