Miyakogusa Predicted Gene
- Lj2g3v1034630.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1034630.2 Non Chatacterized Hit- tr|K3YPP0|K3YPP0_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si016232,28.52,8e-17,seg,NULL,CUFF.36071.2
(2033 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS355706 similar to UniRef100_A7PMN9 Cluster: Chromosom... 615 e-175
gnl|LJGI|TC75318 349 4e-95
gnl|LJGI|BW617333 similar to UniRef100_A7PMN9 Cluster: Chromosom... 337 2e-91
gnl|LJGI|DC597257 similar to UniRef100_UPI000066071F Cluster: Ho... 100 7e-20
gnl|LJGI|BW599079 similar to UniRef100_UPI000066071F Cluster: Ho... 100 7e-20
gnl|LJGI|TC81254 homologue to UniRef100_A9UYH2 Cluster: Predicte... 100 7e-20
>gnl|LJGI|FS355706 similar to UniRef100_A7PMN9 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 449
Score = 615 bits (310), Expect = e-175
Identities = 313/314 (99%)
Strand = Plus / Minus
Query: 1720 caaaagcagcatgctgagtttgtccagagattgaacctcttcaagtacaagctcaacaag 1779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 caaaagcagcatgctgagtttgtccagagattgaacctcttcaagtacaagctcaacaag 390
Query: 1780 gcggtatctgcattgtcgcatctggattttgagatggctttgttttactataggtcttct 1839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gcggtatctgcattgtcgcatctggattttgagatggctttgttttactataggtcttct 330
Query: 1840 gatcatgatctgtatgccattcactccatcgtgtatcacgcctctcaagaaattgaggca 1899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gatcatgatctgtatgccattcactccatcgtgtatcacgcctctcaagaaattgaggca 270
Query: 1900 tcccttgtgtgctttaaggaccctgcatttccctggttttcagcttcaatgtctgcagcg 1959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tcccttgtgtgctttaaggaccctgcatttccctggttttcagcttcaatgtctgcagcg 210
Query: 1960 gctttccttgctctctcttatgtttatgcaaaacgggataaacttttcagaaacaaaagg 2019
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 gctttccttgctctcttttatgtttatgcaaaacgggataaacttttcagaaacaaaagg 150
Query: 2020 aagcaattttgatg 2033
||||||||||||||
Sbjct: 149 aagcaattttgatg 136
>gnl|LJGI|TC75318
Length = 778
Score = 349 bits (176), Expect = 4e-95
Identities = 176/176 (100%)
Strand = Plus / Plus
Query: 491 tcgacgaaatcatcaagcaacacttcctctcctctgaacctctccacaaccagcaccacc 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 tcgacgaaatcatcaagcaacacttcctctcctctgaacctctccacaaccagcaccacc 662
Query: 551 tctacctcatcaacctccccaactccgatcccaaaccctccgatcacaaaccctacgctt 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 tctacctcatcaacctccccaactccgatcccaaaccctccgatcacaaaccctacgctt 722
Query: 611 acacctactccccctccgccgcagactcctccccctccttcaccaactgcctcggc 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 acacctactccccctccgccgcagactcctccccctccttcaccaactgcctcggc 778
Score = 220 bits (111), Expect = 3e-56
Identities = 111/111 (100%)
Strand = Plus / Plus
Query: 31 ctatttctggtgctgtcactggttgttctaagcatcgccgccgcccccatcatcggccta 90
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 ctatttctggtgctgtcactggttgttctaagcatcgccgccgcccccatcatcggccta 202
Query: 91 gactccttcctgacccaccaatcccgcatcgaccctcgcgcctccaacgat 141
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gactccttcctgacccaccaatcccgcatcgaccctcgcgcctccaacgat 253
>gnl|LJGI|BW617333 similar to UniRef100_A7PMN9 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 477
Score = 337 bits (170), Expect = 2e-91
Identities = 170/170 (100%)
Strand = Plus / Plus
Query: 618 ctccccctccgccgcagactcctccccctccttcaccaactgcctcggcaccttctggac 677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ctccccctccgccgcagactcctccccctccttcaccaactgcctcggcaccttctggac 367
Query: 678 ctccgaccaacgctacttctggatcgacctcgccgccggacctgtcgactacggccctgc 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ctccgaccaacgctacttctggatcgacctcgccgccggacctgtcgactacggccctgc 427
Query: 738 tatctccggcgacggtgtcatccctcgcggcgagtttcaccccttcgcta 787
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tatctccggcgacggtgtcatccctcgcggcgagtttcaccccttcgcta 477
Score = 212 bits (107), Expect = 6e-54
Identities = 107/107 (100%)
Strand = Plus / Plus
Query: 31 ctatttctggtgctgtcactggttgttctaagcatcgccgccgcccccatcatcggccta 90
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 ctatttctggtgctgtcactggttgttctaagcatcgccgccgcccccatcatcggccta 200
Query: 91 gactccttcctgacccaccaatcccgcatcgaccctcgcgcctccaa 137
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gactccttcctgacccaccaatcccgcatcgaccctcgcgcctccaa 247
>gnl|LJGI|DC597257 similar to UniRef100_UPI000066071F Cluster: Homolog of Homo sapiens
"Splice Isoform 5B of Cutaneous T-cell
lymphoma-associated antigen 5; n=1; Takifugu
rubripes|Rep: Homolog of Homo sapiens "Splice Isoform 5B
of Cutaneous T-cell lymphoma-associated antigen 5 -
Takifugu rubripes, partial (5%)
Length = 555
Score = 99.6 bits (50), Expect = 7e-20
Identities = 66/70 (94%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 1962 tttccttgctctctcttatgtttatgcaaaacgggataaacttttcagaaacaaaaggaa 2021
||||||||||||||||||||||||||||||||||||| || |||||||||||| ||| ||
Sbjct: 239 tttccttgctctctcttatgtttatgcaaaacgggat-aatttttcagaaacataagaaa 297
Query: 2022 gcaattttga 2031
||||||||||
Sbjct: 298 gcaattttga 307
>gnl|LJGI|BW599079 similar to UniRef100_UPI000066071F Cluster: Homolog of Homo sapiens
"Splice Isoform 5B of Cutaneous T-cell
lymphoma-associated antigen 5; n=1; Takifugu
rubripes|Rep: Homolog of Homo sapiens "Splice Isoform 5B
of Cutaneous T-cell lymphoma-associated antigen 5 -
Takifugu rubripes, partial (5%)
Length = 472
Score = 99.6 bits (50), Expect = 7e-20
Identities = 66/70 (94%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 1962 tttccttgctctctcttatgtttatgcaaaacgggataaacttttcagaaacaaaaggaa 2021
||||||||||||||||||||||||||||||||||||| || |||||||||||| ||| ||
Sbjct: 141 tttccttgctctctcttatgtttatgcaaaacgggat-aatttttcagaaacataagaaa 199
Query: 2022 gcaattttga 2031
||||||||||
Sbjct: 200 gcaattttga 209
>gnl|LJGI|TC81254 homologue to UniRef100_A9UYH2 Cluster: Predicted protein; n=1;
Monosiga brevicollis MX1|Rep: Predicted protein -
Monosiga brevicollis MX1, partial (9%)
Length = 405
Score = 99.6 bits (50), Expect = 7e-20
Identities = 66/70 (94%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 1962 tttccttgctctctcttatgtttatgcaaaacgggataaacttttcagaaacaaaaggaa 2021
||||||||||||||||||||||||||||||||||||| || |||||||||||| ||| ||
Sbjct: 323 tttccttgctctctcttatgtttatgcaaaacgggat-aatttttcagaaacataagaaa 381
Query: 2022 gcaattttga 2031
||||||||||
Sbjct: 382 gcaattttga 391