Miyakogusa Predicted Gene
- Lj2g3v1034410.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1034410.1 Non Chatacterized Hit- tr|J3LYN5|J3LYN5_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB04G2,60.32,0.0000000000007,no description,RNA-binding, CRM
domain; seg,NULL; CRM,RNA-binding, CRM domain; SUBFAMILY NOT
NAMED,N,CUFF.36052.1
(612 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75812 similar to UniRef100_A7PMG5 Cluster: Chromosome... 1197 0.0
>gnl|LJGI|TC75812 similar to UniRef100_A7PMG5 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 1364
Score = 1197 bits (604), Expect = 0.0
Identities = 610/612 (99%)
Strand = Plus / Plus
Query: 1 atgaaaaggactcatgacttgttggagagaaaaactggaggacttgttgtttggagatcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgaaaaggactcatgacttgttggagagaaaaactggaggacttgttgtttggagatcg 500
Query: 61 ggaagtaagataatattgtacagagggactgattataagtatccttacttcctctcagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggaagtaagataatattgtacagagggactgattataagtatccttacttcctctcagat 560
Query: 121 acggtttcgagagatgagcacattggtgatgctgagcaacatatggaacgcgatgatgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acggtttcgagagatgagcacattggtgatgctgagcaacatatggaacgcgatgatgaa 620
Query: 181 aattgtgatgaaagagagaggcactcatctgaaacaaactcagaaatatatgctggccat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aattgtgatgaaagagagaggcactcatctgaaacaaactcagaaatatatgctggccat 680
Query: 241 agttcatactccaaaacatcaaaaccagctttgatacaaggtgttggtactccaaataaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agttcatactccaaaacatcaaaaccagctttgatacaaggtgttggtactccaaataaa 740
Query: 301 gtacgatttcaactgccaggtgaggcagagcttgcagaagatgcagacagcttattagtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gtacgatttcaactgccaggtgaggcagagcttgcagaagatgcagacagcttattagtg 800
Query: 361 gggcttgggccacgatttactgattggtgggggtatgaacctctgcctgtcgatgctgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gggcttgggccacgatttactgattggtgggggtatgaacctctgcctgtcgatgctgat 860
Query: 421 cttctacctgctgttgttcctggatataggaagccttttcgcctacttccatatggtgtg 480
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 861 cttctacctgctgttgttcctggatataggcagccttttcgcctacttccatatggtgtg 920
Query: 481 aagcctaaactgacggatgatgaaatgacaactttgaggagacttagcagacctatacca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 921 aagcctaaactgacggatgatgaaatgacaactttgaggagacttagcagacctatacca 980
Query: 541 tcccatttcgcattaggtagaaacaggaaacttcaaggattggctgctgcaattattaag 600
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 981 tcccatttcgcattaggtagaaacaagaaacttcaaggattggctgctgcaattattaag 1040
Query: 601 ctttgggaaaga 612
||||||||||||
Sbjct: 1041 ctttgggaaaga 1052