Miyakogusa Predicted Gene
- Lj2g3v1024160.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1024160.1 Non Chatacterized Hit- tr|I1N615|I1N615_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.6375 PE=,83.63,0,no
description,NULL; AAA,ATPase, AAA-type, conserved site;
AAA_assoc,AAA-type ATPase, N-terminal dom,CUFF.36008.1
(1374 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64161 similar to UniRef100_A7QCM2 Cluster: Chromosome... 1181 0.0
gnl|LJGI|TC61807 similar to UniRef100_A7PMH8 Cluster: Chromosome... 78 2e-13
>gnl|LJGI|TC64161 similar to UniRef100_A7QCM2 Cluster: Chromosome chr12 scaffold_78,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_78, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (26%)
Length = 650
Score = 1181 bits (596), Expect = 0.0
Identities = 596/596 (100%)
Strand = Plus / Plus
Query: 1 atgtttgctcacataggatccgtgcttgcttccttgatgtttgtatgggctttgtttcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55 atgtttgctcacataggatccgtgcttgcttccttgatgtttgtatgggctttgtttcag 114
Query: 61 caatattttccttatccacttcgcaaccagtttgagaaatactctcaaagattgttcact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 caatattttccttatccacttcgcaaccagtttgagaaatactctcaaagattgttcact 174
Query: 121 cttgtctacccttacatcgaaatcaagttccatgagttcactggggagaggctcactcgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 cttgtctacccttacatcgaaatcaagttccatgagttcactggggagaggctcactcgg 234
Query: 181 agtgaggcttactctgccatagaaaactacctcagctccaaagcctccacacaagcaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 agtgaggcttactctgccatagaaaactacctcagctccaaagcctccacacaagcaaag 294
Query: 241 aagctcaaggctgaaatgggcaagaacaaccagtctcttgttctcagcatggatgatcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 aagctcaaggctgaaatgggcaagaacaaccagtctcttgttctcagcatggatgatcat 354
Query: 301 gaagaagtagctgatgagttcaatggagtcaaactctggtgggcttctgggaagaaagtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gaagaagtagctgatgagttcaatggagtcaaactctggtgggcttctgggaagaaagtt 414
Query: 361 tccaaatcagaatcactttcgtcacgccaccctatgactgatgagaaaaggtactacaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 tccaaatcagaatcactttcgtcacgccaccctatgactgatgagaaaaggtactacaag 474
Query: 421 ctcagtttccataaacacaacagagaagtgattttaggtacatacctgaatcatgtcata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 ctcagtttccataaacacaacagagaagtgattttaggtacatacctgaatcatgtcata 534
Query: 481 aaagaaggtaaggctattacggtgaaaaacaggcagagaaggctttatactaatagtgga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 aaagaaggtaaggctattacggtgaaaaacaggcagagaaggctttatactaatagtgga 594
Query: 541 tcttactggagccatgtggtgtttgagcaccctgcaacatttgaaacactagctat 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 tcttactggagccatgtggtgtttgagcaccctgcaacatttgaaacactagctat 650
>gnl|LJGI|TC61807 similar to UniRef100_A7PMH8 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (60%)
Length = 1158
Score = 77.8 bits (39), Expect = 2e-13
Identities = 165/207 (79%)
Strand = Plus / Plus
Query: 678 ggcttggaagagagggtatttactctatggacctccagggactggaaaatctacaatgat 737
||||||||||||||||||||| | ||||| || ||||| ||||| ||||| || |||||
Sbjct: 775 ggcttggaagagagggtatttgttgtatggtccaccaggaactggcaaatcaaccatgat 834
Query: 738 tgctgccatggcgaacctgttaggctatgatttgtatgatctagaattgacttctgtgaa 797
||||||||||| || | | ||||||| |||||||||| |||||||| | || ||
Sbjct: 835 agctgccatggctaatttcatgaactatgatgtgtatgatcttgaattgacagcagtcaa 894
Query: 798 ggacaacactgaattaaggaagctgctgattgagacatcaagcaaatctgtaattgtgat 857
||| |||||||| | | || |||||||||| ||||| |||||||| | || |||||
Sbjct: 895 ggaaaacactgagctgaaaaaattgctgattgaaacatccagcaaatcaatcatagtgat 954
Query: 858 tgaagatattgattgctcacttgatct 884
|||||| ||||| ||||| |||||||
Sbjct: 955 tgaagacattgactgctctattgatct 981
Score = 69.9 bits (35), Expect = 4e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 562 tttgagcaccctgcaacatttgaaacactagctatggatccagagaagaag 612
|||||||||||||||| ||||||||||| |||||||||||| ||||||||
Sbjct: 659 tttgagcaccctgcaaggtttgaaacactggctatggatccaaagaagaag 709
Score = 60.0 bits (30), Expect = 4e-08
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 280 gttctcagcatggatgatcatgaagaagtagctgatgagttcaatggagtcaaactctgg 339
||||||||||||||||| ||||||| | | ||||||||||| || ||||||||||||
Sbjct: 353 gttctcagcatggatgacaatgaagagatcacagatgagttcaaaggggtcaaactctgg 412
Query: 340 tgggct 345
||||||
Sbjct: 413 tgggct 418