Miyakogusa Predicted Gene
- Lj2g3v1022790.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1022790.1 Non Chatacterized Hit- tr|D8QYY2|D8QYY2_SELML
Putative uncharacterized protein OS=Selaginella
moelle,62.5,2e-18,MAT1,Cdk-activating kinase assembly factor MAT1,
centre; seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY ,CUFF.36006.1
(405 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76999 similar to UniRef100_A7PFL3 Cluster: Chromosome... 347 3e-95
gnl|LJGI|BP063753 similar to UniRef100_A7PFL3 Cluster: Chromosom... 88 5e-17
gnl|LJGI|TC67044 similar to UniRef100_Q6QGZ4 Cluster: Tubulin be... 88 5e-17
gnl|LJGI|GO018318 74 7e-13
gnl|LJGI|TC77971 UniRef100_A0L6F3 Cluster: UreE urease accessory... 74 7e-13
gnl|LJGI|TC69824 74 7e-13
gnl|LJGI|TC76336 72 3e-12
>gnl|LJGI|TC76999 similar to UniRef100_A7PFL3 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (43%)
Length = 560
Score = 347 bits (175), Expect = 3e-95
Identities = 233/255 (91%), Gaps = 13/255 (5%)
Strand = Plus / Plus
Query: 164 attcagaacaaataatggttaatcgagcccgtaaggctgaagaattagctgcagctttgg 223
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 1 attcagaacaaataatggttaatcgtgctcgtaaggctgaagaattagctgcagctttgg 60
Query: 224 cagcaagtaagggacaagctgcccaaactgctaatgatgtg-------------actttg 270
|||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 61 cagcaagtaagggacaagctgccccaactgctaatgatgtgggtgcgagcccagactttg 120
Query: 271 gtgctgttcctcagggacaatatgcacctacatttgcaggacagcctagaccaaccggca 330
|||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||
Sbjct: 121 gtgctgttcctcagggaccatatgcacctacatttgcaggaccgcctagacccaccggca 180
Query: 331 tggctccacagcctttaccactcggagggagtgtcatgccgggctatgcaggtgatgacg 390
||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct: 181 tggctccccagcctttacccctcggagggagtgacatgccgggctatgcaggtgatgacg 240
Query: 391 atgaaacgatgaggc 405
|||||||||||||||
Sbjct: 241 atgaaacgatgaggc 255
>gnl|LJGI|BP063753 similar to UniRef100_A7PFL3 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 476
Score = 87.7 bits (44), Expect = 5e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 197 aggctgaagaattagctgcagctttggcagcaagtaagggacaagctgcccaaactgcta 256
|||||||||||||| ||||| |||||||||||||||||||||| |||| ||||||| ||
Sbjct: 383 aggctgaagaattacctgcaattttggcagcaagtaagggacaacctgctcaaactgata 324
Query: 257 atgatgtg 264
||||||||
Sbjct: 323 atgatgtg 316
>gnl|LJGI|TC67044 similar to UniRef100_Q6QGZ4 Cluster: Tubulin beta chain; n=1;
Ophiostoma minus|Rep: Tubulin beta chain - Ophiostoma
minus, partial (6%)
Length = 816
Score = 87.7 bits (44), Expect = 5e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 197 aggctgaagaattagctgcagctttggcagcaagtaagggacaagctgcccaaactgcta 256
|||||||||||||| ||||| ||||||||||||||||||||||| || | ||||||| ||
Sbjct: 38 aggctgaagaattacctgcaactttggcagcaagtaagggacaaccttctcaaactgata 97
Query: 257 atgatgtg 264
||||||||
Sbjct: 98 atgatgtg 105
>gnl|LJGI|GO018318
Length = 585
Score = 73.8 bits (37), Expect = 7e-13
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 197 aggctgaagaattagctgcagctttggcagcaagtaagggacaagctgcccaaactgcta 256
||||||||||| || ||||| ||||||||||||||| ||||||| |||| ||||||| ||
Sbjct: 367 aggctgaagaactacctgcaactttggcagcaagtatgggacaacctgctcaaactgata 426
Query: 257 atgat 261
|||||
Sbjct: 427 atgat 431
>gnl|LJGI|TC77971 UniRef100_A0L6F3 Cluster: UreE urease accessory domain protein;
n=1; Magnetococcus sp. MC-1|Rep: UreE urease accessory
domain protein - Magnetococcus sp. (strain MC-1),
partial (5%)
Length = 1188
Score = 73.8 bits (37), Expect = 7e-13
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 197 aggctgaagaattagctgcagctttggcagcaagtaagggacaagctgcccaaactgcta 256
||||||||||| || ||||| ||||||||||||||| ||||||| |||| ||||||| ||
Sbjct: 505 aggctgaagaactacctgcaactttggcagcaagtatgggacaacctgctcaaactgata 564
Query: 257 atgat 261
|||||
Sbjct: 565 atgat 569
>gnl|LJGI|TC69824
Length = 1092
Score = 73.8 bits (37), Expect = 7e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 197 aggctgaagaattagctgcagctttggcagcaagtaagggacaag 241
|||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 361 aggctgaagaattacctgcaactttggcagcaagtaagggacaag 405
>gnl|LJGI|TC76336
Length = 1035
Score = 71.9 bits (36), Expect = 3e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 197 aggctgaagaattagctgcagctttggcagcaagtaagggacaagctgcccaaactgcta 256
|||||||| ||||| ||||| ||||||||||||||||||| || |||| ||||||| ||
Sbjct: 160 aggctgaataattacctgcaattttggcagcaagtaagggagaacctgctcaaactgata 219
Query: 257 atgatgtg 264
||||||||
Sbjct: 220 atgatgtg 227