Miyakogusa Predicted Gene
- Lj2g3v1022600.4
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1022600.4 CUFF.35985.4
(948 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BW632036 similar to UniRef100_Q9LSI8 Cluster: Gb|AAC665... 577 e-164
gnl|LJGI|BW628223 456 e-127
gnl|LJGI|GO011243 111 8e-24
>gnl|LJGI|BW632036 similar to UniRef100_Q9LSI8 Cluster: Gb|AAC66597.1; n=1;
Arabidopsis thaliana|Rep: Gb|AAC66597.1 - Arabidopsis
thaliana, partial (8%)
Length = 482
Score = 577 bits (291), Expect = e-164
Identities = 305/312 (97%)
Strand = Plus / Plus
Query: 1 atggcggttttgtcccctccaacaccatcaccactccttctaaacaccaaagcaaatttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 atggcggttttgtcccctccaacaccatcaccactccttctaaacaccaaagcaaatttc 230
Query: 61 gggtcaccatcatcaccttcacctcttcctcttatcaccttctcctccacacccaccaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 gggtcaccatcatcaccttcacctcttcctcttatcaccttctcctccacacccaccaac 290
Query: 121 tacccttcttcgctactcatatcctcttacactaaatccggaaatgggttggcgagtgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 tacccttcttcgctactcatatcctcttacactaaatccggaaatgggttggcgagtgaa 350
Query: 181 gacnnnnnnntcttacttgagcggtatggttatgatgctgatgctgacgagtacttttct 240
||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 gacaaaaaaatcttacttgagcggtatggttatgatgctgatgctgacgagtacttttct 410
Query: 241 caatcatctccaaagtctaagaggataaaggagcagccaaggactagaggagggaagcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 caatcatctccaaagtctaagaggataaaggagcagccaaggactagaggagggaagcaa 470
Query: 301 gtgcaggaccca 312
||||||||||||
Sbjct: 471 gtgcaggaccca 482
>gnl|LJGI|BW628223
Length = 475
Score = 456 bits (230), Expect = e-127
Identities = 247/255 (96%)
Strand = Plus / Plus
Query: 1 atggcggttttgtcccctccaacaccatcaccactccttctaaacaccaaagcaaatttc 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 163 atggcggttttgtcccctccaacaccatcaccactccttctaaacgccaaagcaaatttc 222
Query: 61 gggtcaccatcatcaccttcacctcttcctcttatcaccttctcctccacacccaccaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 gggtcaccatcatcaccttcacctcttcctcttatcaccttctcctccacacccaccaac 282
Query: 121 tacccttcttcgctactcatatcctcttacactaaatccggaaatgggttggcgagtgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 tacccttcttcgctactcatatcctcttacactaaatccggaaatgggttggcgagtgaa 342
Query: 181 gacnnnnnnntcttacttgagcggtatggttatgatgctgatgctgacgagtacttttct 240
||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 gacaaaaaaatcttacttgagcggtatggttatgatgctgatgctgacgagtacttttct 402
Query: 241 caatcatctccaaag 255
|||||||||||||||
Sbjct: 403 caatcatctccaaag 417
Score = 119 bits (60), Expect = 3e-26
Identities = 60/60 (100%)
Strand = Plus / Plus
Query: 356 aggttcttgggggaacagctcgaagaaagaagctactctcacctaagggcatggatgtac 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 aggttcttgggggaacagctcgaagaaagaagctactctcacctaagggcatggatgtac 475
>gnl|LJGI|GO011243
Length = 605
Score = 111 bits (56), Expect = 8e-24
Identities = 56/56 (100%)
Strand = Plus / Plus
Query: 893 ggttcggccggacgctcttggcaatttatggaccaacatgggcccaaaagaagagg 948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggttcggccggacgctcttggcaatttatggaccaacatgggcccaaaagaagagg 56