Miyakogusa Predicted Gene

Lj2g3v1022510.2

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1022510.2 Non Chatacterized Hit- tr|I1N5Z8|I1N5Z8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.24041
PE,83.89,0,seg,NULL; ABC_TRANSPORTER_2,ABC transporter-like;
ABC_TM1F,ABC transporter, integral membrane type 1,CUFF.36040.2
         (3801 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV777119 homologue to UniRef100_A7PMJ8 Cluster: Chromos...   440   e-122
gnl|LJGI|FS361887 similar to UniRef100_A7Q0Z8 Cluster: Chromosom...    56   2e-06

>gnl|LJGI|AV777119 homologue to UniRef100_A7PMJ8 Cluster: Chromosome chr14 scaffold_21,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr14 scaffold_21, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (12%)
          Length = 447

 Score =  440 bits (222), Expect = e-122
 Identities = 222/222 (100%)
 Strand = Plus / Minus

                                                                        
Query: 3580 gttatggtggggaggactagtgtggtggtggctcacaggttgagcaccattcaaaactgt 3639
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447  gttatggtggggaggactagtgtggtggtggctcacaggttgagcaccattcaaaactgt 388

                                                                        
Query: 3640 gatctgattgctgtgttggataaggggagggtggtggagaaagggtcccattcaaacttg 3699
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387  gatctgattgctgtgttggataaggggagggtggtggagaaagggtcccattcaaacttg 328

                                                                        
Query: 3700 ttggctaagggaccaagtggagcttattactctttggtgagtctgcagagaagaccaagc 3759
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327  ttggctaagggaccaagtggagcttattactctttggtgagtctgcagagaagaccaagc 268

                                                      
Query: 3760 aattacactgttgctactgactctacaggtgaaatcaactaa 3801
            ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267  aattacactgttgctactgactctacaggtgaaatcaactaa 226


>gnl|LJGI|FS361887 similar to UniRef100_A7Q0Z8 Cluster: Chromosome chr7 scaffold_42,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr7 scaffold_42, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (19%)
          Length = 748

 Score = 56.0 bits (28), Expect = 2e-06
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                    
Query: 1573 gatgaagcaacaagcgcactggactccgagtctgaacgagtcgtgcaagaagctct 1628
            |||||||||||||||||||| || || ||||||||| | || |||||||| |||||
Sbjct: 186  gatgaagcaacaagcgcacttgattcggagtctgaaagggtagtgcaagaggctct 131