Miyakogusa Predicted Gene
- Lj2g3v1022350.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1022350.2 Non Chatacterized Hit- tr|I0YZF3|I0YZF3_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,42.59,7e-18,seg,NULL; SIN3B-RELATED,NULL,CUFF.35987.2
(411 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79665 similar to UniRef100_A7PMK0 Cluster: Chromosome... 561 e-159
gnl|LJGI|AV415593 similar to UniRef100_Q0JRB9 Cluster: Os01g0109... 58 4e-08
gnl|LJGI|BW600158 similar to UniRef100_A7Q2L0 Cluster: Chromosom... 56 2e-07
>gnl|LJGI|TC79665 similar to UniRef100_A7PMK0 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 537
Score = 561 bits (283), Expect = e-159
Identities = 306/311 (98%), Gaps = 2/311 (0%)
Strand = Plus / Plus
Query: 61 aagcatgtatcggcagtttcatttgctgaagaaatgaaggattcaagggtgttttatggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 227 aagcatgtatcggcagtttcatttgctgaagaaatgaaggattcaagggtgttgaatggg 286
Query: 121 aatgacgatttctatgcgctttttaggcttcatcaaattctttacgagaggatcttatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 aatgacgatttctatgcgctttttaggcttcatcaaattctttacgagaggatcttatca 346
Query: 181 gcgaaaataaattcaatgagtgctgaaatgaaatggaaggcaaaagatgctagttcccct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 gcgaaaataaattcaatgagtgctgaaatgaaatggaaggcaaaagatgctagttcccct 406
Query: 241 gatccttactcaagatttatgaat-gcattgtacaacttgcttgatggatctgttgagaa 299
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 407 gatccttactcaagatttatgaatggcattgtacaacttgcttgatggatctgttgagaa 466
Query: 300 ttcaaagtttgaagatgagtgccgagcaa-ttactggaaaccagtcttatgtcttattca 358
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 467 ttcaaagtttgaagatgagtgccgagcaaggtactggaaaccagtcttatgtcttattca 526
Query: 359 cattggataaa 369
|||||||||||
Sbjct: 527 cattggataaa 537
Score = 125 bits (63), Expect = 2e-28
Identities = 63/63 (100%)
Strand = Plus / Plus
Query: 1 atgatgatgttgatggtaaggctgagagtgaaggtgaagctgaggggatgtgtgatgccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 atgatgatgttgatggtaaggctgagagtgaaggtgaagctgaggggatgtgtgatgccc 158
Query: 61 aag 63
|||
Sbjct: 159 aag 161
>gnl|LJGI|AV415593 similar to UniRef100_Q0JRB9 Cluster: Os01g0109700 protein; n=3;
Oryza sativa Japonica Group|Rep: Os01g0109700 protein -
Oryza sativa subsp. japonica (Rice), partial (9%)
Length = 416
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 17 taaggctgagagtgaaggtgaagctgaggggatgtgtgatgccca 61
||||||||||||||||||||||||||| || ||| |||||||||
Sbjct: 128 taaggctgagagtgaaggtgaagctgaaggaatggttgatgccca 172
>gnl|LJGI|BW600158 similar to UniRef100_A7Q2L0 Cluster: Chromosome chr1 scaffold_46,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_46, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 436
Score = 56.0 bits (28), Expect = 2e-07
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 302 caaagtttgaagatgagtgccgagcaattactggaaaccagtcttatgtcttattcacat 361
|||| ||||||||||| || ||||| |||| ||||| ||||| || |||||||||||||
Sbjct: 13 caaaatttgaagatgactgtcgagctattattggaattcagtcgtacgtcttattcacat 72
Query: 362 tggataaattgatatataaa 381
| || || |||||||||||
Sbjct: 73 tagacaagctgatatataaa 92