Miyakogusa Predicted Gene
- Lj2g3v1022320.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1022320.1 Non Chatacterized Hit- tr|K3YU08|K3YU08_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si017754,26.57,3e-18,seg,NULL; coiled-coil,NULL; DUF760,Protein of
unknown function DUF760,CUFF.35971.1
(1086 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59453 similar to UniRef100_A7PMK3 Cluster: Chromosome... 1972 0.0
gnl|LJGI|AV420901 similar to UniRef100_A7PMK3 Cluster: Chromosom... 539 e-152
gnl|LJGI|BW609574 homologue to UniRef100_A7PMK3 Cluster: Chromos... 391 e-108
gnl|LJGI|BP068331 homologue to UniRef100_A7PMK3 Cluster: Chromos... 220 1e-56
>gnl|LJGI|TC59453 similar to UniRef100_A7PMK3 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (65%)
Length = 1438
Score = 1972 bits (995), Expect = 0.0
Identities = 995/995 (100%)
Strand = Plus / Plus
Query: 92 tcctccgccgccgccgctgcttcctcacctcctgctacgccgatgggttctcgtcgtcct 151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 tcctccgccgccgccgctgcttcctcacctcctgctacgccgatgggttctcgtcgtcct 267
Query: 152 cttcttcctcatcctctgacgatgtcgtctccacccggaaatccaccttcgaccgcggct 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 cttcttcctcatcctctgacgatgtcgtctccacccggaaatccaccttcgaccgcggct 327
Query: 212 tcaccgtcatcgccaacatgctccgccgcatcgagcccctcgataactccgtcatctcaa 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 tcaccgtcatcgccaacatgctccgccgcatcgagcccctcgataactccgtcatctcaa 387
Query: 272 agggtgtctccgacgccgccagagactccatgaagcagaccatctccaccatgctcggtt 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 agggtgtctccgacgccgccagagactccatgaagcagaccatctccaccatgctcggtt 447
Query: 332 tgctcccctccgatcacttctctgtcactgtcactgtttccaagcaccccctccatcgtc 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 tgctcccctccgatcacttctctgtcactgtcactgtttccaagcaccccctccatcgtc 507
Query: 392 ttctcgtctcttccatcatcaccgggtacactctgtggaatgcggagtacaggatgtccc 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 ttctcgtctcttccatcatcaccgggtacactctgtggaatgcggagtacaggatgtccc 567
Query: 452 tgacgaggaatctggatatagcatcgccctgtggtgcaagagattcggattgtgagaaac 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 tgacgaggaatctggatatagcatcgccctgtggtgcaagagattcggattgtgagaaac 627
Query: 512 gttcagagatcttggaggttaagggtggaggagaggatggtggggaaattgaggttgctt 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 gttcagagatcttggaggttaagggtggaggagaggatggtggggaaattgaggttgctt 687
Query: 572 ctgatttggggctcaaggatttggaaaattgcagtagtagcccgagagtgtttggagatt 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 ctgatttggggctcaaggatttggaaaattgcagtagtagcccgagagtgtttggagatt 747
Query: 632 tgcctcctcaggctctcaattacattcagcagttgcagtctgagttgacaaatgtgaagg 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 tgcctcctcaggctctcaattacattcagcagttgcagtctgagttgacaaatgtgaagg 807
Query: 692 aggagctgaatgcccgaaagcaagaaatgatgcaattagaatatgacaggggaatcagga 751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 aggagctgaatgcccgaaagcaagaaatgatgcaattagaatatgacaggggaatcagga 867
Query: 752 acaatttgttggaatatctccggtctttggatcctgaaatggtgactgaactgtctcgac 811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 acaatttgttggaatatctccggtctttggatcctgaaatggtgactgaactgtctcgac 927
Query: 812 cttcatcggtagaagtggaggatataattcaccaacttgttcagaacatattaagcagat 871
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 928 cttcatcggtagaagtggaggatataattcaccaacttgttcagaacatattaagcagat 987
Query: 872 tctttgtggatgatgctagtggtagctttatggaacaatcagtagaaggaaacatagaca 931
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 988 tctttgtggatgatgctagtggtagctttatggaacaatcagtagaaggaaacatagaca 1047
Query: 932 atcatccggacaacggtgatgagtttagtgatacagtaggcacttctcgtgattaccttg 991
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1048 atcatccggacaacggtgatgagtttagtgatacagtaggcacttctcgtgattaccttg 1107
Query: 992 caaagttgcttttctggtgtatgttgttaggtcatcacttaagaggattagaaaacagat 1051
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1108 caaagttgcttttctggtgtatgttgttaggtcatcacttaagaggattagaaaacagat 1167
Query: 1052 tgcaacttagctgcgtcgttggactgttgtagata 1086
|||||||||||||||||||||||||||||||||||
Sbjct: 1168 tgcaacttagctgcgtcgttggactgttgtagata 1202
Score = 58.0 bits (29), Expect = 1e-07
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 1 atggcagcactctcatggcgacccttcat 29
|||||||||||||||||||||||||||||
Sbjct: 117 atggcagcactctcatggcgacccttcat 145
>gnl|LJGI|AV420901 similar to UniRef100_A7PMK3 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 315
Score = 539 bits (272), Expect = e-152
Identities = 275/276 (99%)
Strand = Plus / Plus
Query: 279 ctccgacgccgccagagactccatgaagcagaccatctccaccatgctcggtttgctccc 338
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40 ctccgccgccgccagagactccatgaagcagaccatctccaccatgctcggtttgctccc 99
Query: 339 ctccgatcacttctctgtcactgtcactgtttccaagcaccccctccatcgtcttctcgt 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 ctccgatcacttctctgtcactgtcactgtttccaagcaccccctccatcgtcttctcgt 159
Query: 399 ctcttccatcatcaccgggtacactctgtggaatgcggagtacaggatgtccctgacgag 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 ctcttccatcatcaccgggtacactctgtggaatgcggagtacaggatgtccctgacgag 219
Query: 459 gaatctggatatagcatcgccctgtggtgcaagagattcggattgtgagaaacgttcaga 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 gaatctggatatagcatcgccctgtggtgcaagagattcggattgtgagaaacgttcaga 279
Query: 519 gatcttggaggttaagggtggaggagaggatggtgg 554
||||||||||||||||||||||||||||||||||||
Sbjct: 280 gatcttggaggttaagggtggaggagaggatggtgg 315
>gnl|LJGI|BW609574 homologue to UniRef100_A7PMK3 Cluster: Chromosome chr14
scaffold_21, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_21, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (11%)
Length = 483
Score = 391 bits (197), Expect = e-108
Identities = 197/197 (100%)
Strand = Plus / Plus
Query: 92 tcctccgccgccgccgctgcttcctcacctcctgctacgccgatgggttctcgtcgtcct 151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 tcctccgccgccgccgctgcttcctcacctcctgctacgccgatgggttctcgtcgtcct 346
Query: 152 cttcttcctcatcctctgacgatgtcgtctccacccggaaatccaccttcgaccgcggct 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 cttcttcctcatcctctgacgatgtcgtctccacccggaaatccaccttcgaccgcggct 406
Query: 212 tcaccgtcatcgccaacatgctccgccgcatcgagcccctcgataactccgtcatctcaa 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 tcaccgtcatcgccaacatgctccgccgcatcgagcccctcgataactccgtcatctcaa 466
Query: 272 agggtgtctccgacgcc 288
|||||||||||||||||
Sbjct: 467 agggtgtctccgacgcc 483
Score = 58.0 bits (29), Expect = 1e-07
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 1 atggcagcactctcatggcgacccttcat 29
|||||||||||||||||||||||||||||
Sbjct: 196 atggcagcactctcatggcgacccttcat 224
>gnl|LJGI|BP068331 homologue to UniRef100_A7PMK3 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 433
Score = 220 bits (111), Expect = 1e-56
Identities = 273/302 (90%), Gaps = 20/302 (6%)
Strand = Plus / Minus
Query: 805 tctcgaccttcatc-ggtagaagtggaggatataattca-ccaacttgttc-agaacata 861
|||||||||||||| |||||||||||||||||||||||| || |||| ||| || |||||
Sbjct: 433 tctcgaccttcatccggtagaagtggaggatataattcatcccacttcttctagtacata 374
Query: 862 tta-agcagattc-tttgt-ggatgatgcta-gtggtagct-ttat-ggaacaatcag-t 914
||| ||||||||| ||||| ||||||||||| ||||||||| |||| |||||||||| |
Sbjct: 373 ttacagcagattcctttgttggatgatgctaagtggtagctgttatcggaacaatcacct 314
Query: 915 a-ga-aggaaa-ca-tagacaatcatcc-gga-caacggtgatgagtttagtgatacagt 968
| || |||||| || ||||||||||||| ||| | ||||||||||||||||||||||||
Sbjct: 313 acgacaggaaaacagtagacaatcatcccggatccccggtgatgagtttagtgatacagt 254
Query: 969 aggc-acttctcgtgatta-ccttgc--aaagttgcttttctggtgtatgttgttaggtc 1024
|||| |||||||||||||| |||||| | ||||||||||||||| ||||||||||||||
Sbjct: 253 aggccacttctcgtgattagccttgcccacagttgcttttctggtttatgttgttaggtc 194
Query: 1025 atcacttaagaggattagaaaacagattgcaacttagctgcgtcgttggactgttgtaga 1084
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 193 atcacttaagaggattagaaaacagattgcgacttagctgcgtcgttggactgttgtaga 134
Query: 1085 ta 1086
||
Sbjct: 133 ta 132