Miyakogusa Predicted Gene

Lj2g3v1022310.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1022310.1 tr|G7JJU6|G7JJU6_MEDTR Sensor protein rcsC
OS=Medicago truncatula GN=MTR_4g071650 PE=4 SV=1,39.6,0.00000005,no
description,NULL; CheY-like,CheY-like superfamily,gene.g40564.t1.1
         (310 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC59892 weakly similar to UniRef100_A3MVE7 Cluster: Mol...   559   e-159

>gnl|LJGI|TC59892 weakly similar to UniRef100_A3MVE7 Cluster: Molybdenum cofactor
           synthesis domain; n=1; Pyrobaculum calidifontis JCM
           11548|Rep: Molybdenum cofactor synthesis domain -
           Pyrobaculum calidifontis (strain JCM 11548 / VA1),
           partial (5%)
          Length = 821

 Score =  559 bits (282), Expect = e-159
 Identities = 282/282 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaattccaacattactggattcaaacgacaaaggaactctgaggatgagagtttgcca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 atgaattccaacattactggattcaaacgacaaaggaactctgaggatgagagtttgcca 165

                                                                       
Query: 61  ctcggaaaacgccaattagatggcattccttgcatgaaggtattgctagtggatggagag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 ctcggaaaacgccaattagatggcattccttgcatgaaggtattgctagtggatggagag 225

                                                                       
Query: 121 actgcatccagggtctggatgcaaggaatgctagcatcactaggcattgagacagtccct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 actgcatccagggtctggatgcaaggaatgctagcatcactaggcattgagacagtccct 285

                                                                       
Query: 181 gtgtatagtgctcaacatgcaataatagaattggagactcatgatcatcgtggacacttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 gtgtatagtgctcaacatgcaataatagaattggagactcatgatcatcgtggacacttt 345

                                                     
Query: 241 gacttcatgttcattgattggtctattaagaatgcacttgag 282
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 gacttcatgttcattgattggtctattaagaatgcacttgag 387