Miyakogusa Predicted Gene
- Lj2g3v1021080.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1021080.1 Non Chatacterized Hit- tr|I1N5X8|I1N5X8_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,60,0.0000000002,YhbY-like,RNA-binding, CRM domain;
coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.35953.1
(1404 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79215 similar to UniRef100_A7PMG5 Cluster: Chromosome... 1639 0.0
gnl|LJGI|TC75812 similar to UniRef100_A7PMG5 Cluster: Chromosome... 339 3e-92
gnl|LJGI|TC76822 similar to UniRef100_A7PMG5 Cluster: Chromosome... 307 1e-82
>gnl|LJGI|TC79215 similar to UniRef100_A7PMG5 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 954
Score = 1639 bits (827), Expect = 0.0
Identities = 920/949 (96%), Gaps = 4/949 (0%)
Strand = Plus / Plus
Query: 342 tgcagattctgaaggaaatggtgtgacctttcagaaagatacagaaatcttcaaaaaaga 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tgcagattctgaaggaaatggtgtgacctttcagaaagatacagaaatcttcaaaaaaga 61
Query: 402 attgttaactaaagctaaggaagctaataaattcaaaaagagtagcatcaaattgtcaat 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 attgttaactaaagctaaggaagctaataaattcaaaaagagtagcatcaaattgtcaat 121
Query: 462 ggcattagagaagaaagcaaaggctgaaaaacttctagcagagctggaaaatgcagagag 521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ggcattagagaagaaagcaaaggctgaaaaacttctagcagagctggaaaatgcagagag 181
Query: 522 cccccaagaacaagaaattgataaagagggtattacggaagaagagagatacatgctgcg 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 cccccaagaacaagaaattgataaagagggtattacggaagaagagagatacatgctgcg 241
Query: 582 gaagattggcttgaagatgcagcccttccttttattaggtagacgaggggtttttgatgg 641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gaagattggcttgaagatgcagcccttccttttattaggtagacgaggggtttttgatgg 301
Query: 642 aacagtggaaaatatgcatcttcattggaaatatcgggagctcgtgaaggtaatatgtaa 701
||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 302 gacagtggaaaatatgcatcttcattggaagtatcgggagcttgtgaaggtaatatgtaa 361
Query: 702 agagggaagcctggaagctgtttatcaggtagctcagaccttagaggcagaaagtggtgg 761
||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 362 agagggaagtctggaagctgtccatcaggtagctcagaccttagaggcagaaagtggtgg 421
Query: 762 aatattagttgcagtagagagagtgagcaagggctatgcaatcattgtgtatcgtggaaa 821
||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 422 aatattagtggcagtggagagagtgagcaagggctatgcaatcattgtttatcgtggaaa 481
Query: 822 gaattacagtagacctgctagtttgaggcctcaaacactcttaaataaaaagctagcaat 881
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 482 gaattacagtagacctgctagtttgaggcctcaaacactcttaaataaaaagctagcatt 541
Query: 882 gaagcgttctatagaggcacagcgctatgagtcattgaagcttcatgttttgaacctaga 941
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gaagcgttctatagaggcacagcgctatgagtcattgaagcttcatgttttgaacctaga 601
Query: 942 taaaaacataaatgagttgaaacttcaaatggttaaagat---gaggctaatagtaagca 998
|||||||||||| || |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 602 taaaaacataaacgaattgaaacttcaaatggttaaagatgaggaggctaatagtaagca 661
Query: 999 gatgcctgaaacgttgagatctgacttggttacagacaaacatggagctagtacaaattc 1058
|||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 662 gatgcctgaaacgtcgagatctgacttggttacagacaaacatggaacttgtacaaattc 721
Query: 1059 tactagttgcaattctccaaaagaagcttcttttgagaatcaacaagcaatacaggagca 1118
||| ||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||
Sbjct: 722 tacaagttgcaattctccaaaagaagcttctcttgacaatcaaccagcaatacaggagca 781
Query: 1119 gcaggttgagctcattgatggtggtggagctcgtccaggtgaattagattcctgggctgg 1178
|||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 782 gcaggttgagctgattgatggtggtggagctcgtccaggtgaattaggttcctgggctgg 841
Query: 1179 ttcgattcataaagaaacacagccggacgtagtgagtgattctgtggtggatgctggaca 1238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 842 ttcgattcataaagaaacacagccggacgtagtgagtgattctgtggtggatgctgggca 901
Query: 1239 ctgtgcctctaatgaaaaagatatggaatcatcaatcgcatcatcaaaa 1287
||||| |||||||| |||||| ||||||||||||||| |||||||||||
Sbjct: 902 ctgtgtctctaatg-aaaagaaatggaatcatcaatcacatcatcaaaa 949
>gnl|LJGI|TC75812 similar to UniRef100_A7PMG5 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 1364
Score = 339 bits (171), Expect = 3e-92
Identities = 180/183 (98%)
Strand = Plus / Plus
Query: 1 atgacaactttgaggagacttagcagacctataccatcccatttcgcgttaggtagaaac 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 945 atgacaactttgaggagacttagcagacctataccatcccatttcgcattaggtagaaac 1004
Query: 61 aggaaacttcaaggattggctgctgcaattattaagctttgggaaagatgcgagattgtc 120
| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1005 aagaaacttcaaggattggctgctgcaattattaagctttgggaaagatgtgagattgtc 1064
Query: 121 aagattgctgtaaagagaggtgtgcagaatactaacagtgagattatggctgaagagata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1065 aagattgctgtaaagagaggtgtgcagaatactaacagtgagattatggctgaagagata 1124
Query: 181 aag 183
|||
Sbjct: 1125 aag 1127
>gnl|LJGI|TC76822 similar to UniRef100_A7PMG5 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 834
Score = 307 bits (155), Expect = 1e-82
Identities = 194/208 (93%), Gaps = 1/208 (0%)
Strand = Plus / Plus
Query: 1198 cagccggacgtagtgagtgattctgtggtggatgctggacactgtgcctctaatgaaaaa 1257
|||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 103 cagccggacgtagtgagtgattctgtggtggatgctgggcactgtgtctctaatgaaaaa 162
Query: 1258 gatatggaatcatcaatcgcatcatcaaaaagtgatcctgaaccaccagcttcaattata 1317
|| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 163 gaaatggaatcatcaatcacatcatcaaaaagtgatcctgaaccaccagcttcagttata 222
Query: 1318 agtaggagatcgaatg-annnnnnnccagatctgtatttctttccaacagagagagacta 1376
|||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 223 agtaggagatcgaatgttttaccttccagatctgtatttctttccaacagagagagacta 282
Query: 1377 cttcttcgaaagcaggccttacagatga 1404
||||||||||||||||||||||||||||
Sbjct: 283 cttcttcgaaagcaggccttacagatga 310
Score = 67.9 bits (34), Expect = 2e-10
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 1167 ttcctgggctggttcgattcataaagaaacacag 1200
||||||||||||||||||||||||||||||||||
Sbjct: 3 ttcctgggctggttcgattcataaagaaacacag 36