Miyakogusa Predicted Gene
- Lj2g3v1019990.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1019990.1 Non Chatacterized Hit- tr|I1KBM9|I1KBM9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.12018
PE,33.03,1e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.35996.1
(793 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO016164 weakly similar to UniRef100_A7Q8I2 Cluster: Ch... 813 0.0
gnl|LJGI|TC72238 weakly similar to UniRef100_A7PMF5 Cluster: Chr... 133 2e-30
gnl|LJGI|BU494422 weakly similar to UniRef100_A7PMF5 Cluster: Ch... 125 4e-28
gnl|LJGI|BP054257 similar to UniRef100_Q953X1 Cluster: NADH-ubiq... 107 1e-22
gnl|LJGI|TC81576 similar to UniRef100_A7PMF6 Cluster: Chromosome... 98 1e-19
gnl|LJGI|TC79382 weakly similar to UniRef100_A7PMF5 Cluster: Chr... 70 2e-11
>gnl|LJGI|GO016164 weakly similar to UniRef100_A7Q8I2 Cluster: Chromosome chr5
scaffold_64, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_64, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (12%)
Length = 840
Score = 813 bits (410), Expect = 0.0
Identities = 439/448 (97%), Gaps = 8/448 (1%)
Strand = Plus / Minus
Query: 353 aagactacatgactgaagcaaggcctaaacattataagcagttggaggattggctgaaag 412
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 840 aagactacatgactgaagcaaggcctaaacattataagcagt-ggaggattggctgaaag 782
Query: 413 aagggacaacaggaacaaacgattcaaacagtgtaaacagacagaatgttgcatcaattt 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 aagggacaacaggaacaaacgattcaaacagtgtaaacagacagaatgttgcatcaattt 722
Query: 473 taaccattgattcttgcttctgggcacatgttgaagaggctctcatttcatgcaaatggt 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 taaccattgattcttgcttctgggcacatgttgaagaggctctcatttcatgcaaatggt 662
Query: 533 tgaag-------gatgtacaatctagtgtcactgagaaggaagatgcaactaggaaattg 585
||||| |||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 661 tgaagcctgaaggatgtacaatctagtgtcgctgagaaggaagatgcaactaggaaattg 602
Query: 586 cttgaatttgaggagtatgtttatgtggggttaacaaagtatgcagtgtcaccagagatt 645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cttgaatttgaggagtatgtttatgtggggttaacaaagtatgcagtgtcaccagagatt 542
Query: 646 ttcctgaaggaaagcagctacatgacatggtggaatcagtataagtcaattaagggagtt 705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttcctgaaggaaagcagctacatgacatggtggaatcagtataagtcaattaagggagtt 482
Query: 706 tcatatggttctgcacttgcacgcttcatgagcaatgcttacaattataatgtgcaatat 765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tcatatggttctgcacttgcacgcttcatgagcaatgcttacaattataatgtgcaatat 422
Query: 766 gttgaaggagcttacaatttcgactgaa 793
||||||||||||||||||||||||||||
Sbjct: 421 gttgaaggagcttacaatttcgactgaa 394
>gnl|LJGI|TC72238 weakly similar to UniRef100_A7PMF5 Cluster: Chromosome chr14
scaffold_21, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_21, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (30%)
Length = 1233
Score = 133 bits (67), Expect = 2e-30
Identities = 148/175 (84%)
Strand = Plus / Plus
Query: 185 agttccataaaaacctcacgaactactgggaagagatggttgaagaggcagagatgaagc 244
||||||||||||| || | || ||||||||| ||||||||| ||| | |||| | ||||
Sbjct: 373 agttccataaaaagctaaaaaattactgggaaaagatggttggagaagtagaggtaaagc 432
Query: 245 ctcagaaagaaggcgcagcttttcgtacccgttggctctttgccgggactaattacagga 304
|||| | |||||| || |||||||||| || |||||||||| || |||| ||||||||
Sbjct: 433 ctcaaacagaaggtgcggcttttcgtaaacgctggctctttggtggcactacttacagga 492
Query: 305 gaatggttgaacccttagacattgctcaatactatagagaagggggtgaagacta 359
|||||||||||||||||| ||||| |||||||||| ||| ||||||||||||||
Sbjct: 493 gaatggttgaacccttagctattgcccaatactataaagatgggggtgaagacta 547
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 472 ttaaccattgattcttgcttctgggcacatgttgaagaggctctcatttcatgcaaatgg 531
|||||||| ||||| ||||| |||||||||||||||||||||||| ||| |||||| |
Sbjct: 654 ttaaccatagattcatgcttttgggcacatgttgaagaggctctccgttcttgcaaagag 713
Query: 532 ttgaagg 538
|||||||
Sbjct: 714 ttgaagg 720
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 579 gaaattgcttgaatttgaggagtatgtttat 609
||||||| |||||||||||||||||||||||
Sbjct: 749 gaaattggttgaatttgaggagtatgtttat 779
>gnl|LJGI|BU494422 weakly similar to UniRef100_A7PMF5 Cluster: Chromosome chr14
scaffold_21, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_21, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (24%)
Length = 550
Score = 125 bits (63), Expect = 4e-28
Identities = 270/339 (79%)
Strand = Plus / Plus
Query: 26 tccaaaagaggaaaacatttgatccatcctggaaattgaatcgggtgaagatagacatgg 85
|||||| ||||| || ||||||||| ||| ||||||||||| ||||| | ||||||
Sbjct: 26 tccaaaggaggataatatttgatccttccaagaaattgaatcaaatgaagggacacatgg 85
Query: 86 ccaaacttgaatggtacaagaagtcttctaaaaatcaagatacaggatactatgacagct 145
| |||||||||||||||||||| ||||| || | | | ||| |||||||||||||
Sbjct: 86 ctcaacttgaatggtacaagaaggaaactaaagatgaggggaaagggtactatgacagct 145
Query: 146 acaaaaagatgtgctttacaagtgaccaagatgttattaagttccataaaaacctcacga 205
|||| || |||| || ||| ||||| |||||| | || | || ||||| || || |
Sbjct: 146 acaagaacatgtactaccaaagggaccatgatgttgtagagctgcacaaaaagctaacca 205
Query: 206 actactgggaagagatggttgaagaggcagagatgaagcctcagaaagaaggcgcagctt 265
||||||||| ||||||||||||| ||| || |||||||||||| ||||||| | ||||
Sbjct: 206 tttactgggaaaagatggttgaagaagcaaagttgaagcctcagagagaaggctccgctt 265
Query: 266 ttcgtacccgttggctctttgccgggactaattacaggagaatggttgaacccttagaca 325
|||||||||||| |||| || || |||| |||||||||||||||||||| |||| |
Sbjct: 266 ttcgtacccgttatctctatggtggaactacctacaggagaatggttgaaccattagcta 325
Query: 326 ttgctcaatactatagagaagggggtgaagactacatga 364
|| |||| ||||||| ||| |||||||| ||||| ||||
Sbjct: 326 tttctcagtactataaagacgggggtgatgactatatga 364
Score = 77.8 bits (39), Expect = 9e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 472 ttaaccattgattcttgcttctgggcacatgttgaagaggctctcatttcatgcaaatgg 531
|||||||| ||||||||||| ||||||||||||||||| |||||| | ||||||||| |
Sbjct: 475 ttaaccatagattcttgcttttgggcacatgttgaagaagctctcctctcatgcaaagag 534
Query: 532 ttgaagg 538
|||||||
Sbjct: 535 ttgaagg 541
>gnl|LJGI|BP054257 similar to UniRef100_Q953X1 Cluster: NADH-ubiquinone oxidoreductase
chain 4; n=1; Terebratalia transversa|Rep:
NADH-ubiquinone oxidoreductase chain 4 - Terebratalia
transversa, partial (4%)
Length = 410
Score = 107 bits (54), Expect = 1e-22
Identities = 75/82 (91%)
Strand = Plus / Minus
Query: 712 ggttctgcacttgcacgcttcatgagcaatgcttacaattataatgtgcaatatgttgaa 771
|||||||| ||||| |||||||||| ||||||||||||||||||| || ||||||||||
Sbjct: 404 ggttctgcccttgcccgcttcatgacaaatgcttacaattataatgggccatatgttgaa 345
Query: 772 ggagcttacaatttcgactgaa 793
|||||||||| |||||||||||
Sbjct: 344 ggagcttacactttcgactgaa 323
>gnl|LJGI|TC81576 similar to UniRef100_A7PMF6 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 971
Score = 97.6 bits (49), Expect = 1e-19
Identities = 100/117 (85%)
Strand = Plus / Plus
Query: 243 gcctcagaaagaaggcgcagcttttcgtacccgttggctctttgccgggactaattacag 302
||||| || |||||| ||||||||||||| ||| ||||||| || |||||| ||||||
Sbjct: 324 gcctcggagagaaggtgcagcttttcgtaaccgctggctctatggtgggactgcttacag 383
Query: 303 gagaatggttgaacccttagacattgctcaatactatagagaagggggtgaagacta 359
|||||||||||||||||||| |||| ||||||||| ||| ||||||||||||||
Sbjct: 384 gagaatggttgaacccttagctattggcgaatactataaagatgggggtgaagacta 440
Score = 52.0 bits (26), Expect = 5e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 481 gattcttgcttctgggcacatgttgaagaggctctcatttcatgcaaatggttgaagg 538
||||| ||||| ||||||||||| ||||||||| | ||||||||||| ||||||||
Sbjct: 565 gattcatgcttttgggcacatgtggaagaggctaacctttcatgcaaagagttgaagg 622
>gnl|LJGI|TC79382 weakly similar to UniRef100_A7PMF5 Cluster: Chromosome chr14
scaffold_21, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_21, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (20%)
Length = 1224
Score = 69.9 bits (35), Expect = 2e-11
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 289 gggactaattacaggagaatggttgaacccttagacattgctcaatactatagagaaggg 348
||||||| |||||||||||| ||||||||||||| ||||| |||||||||| ||| |||
Sbjct: 482 gggactacttacaggagaattgttgaacccttagttattgcccaatactataaagagggg 541
Query: 349 ggt 351
|||
Sbjct: 542 ggt 544
Score = 56.0 bits (28), Expect = 3e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 579 gaaattgcttgaatttgaggagtatgtt 606
||||||||||||||||||||||||||||
Sbjct: 760 gaaattgcttgaatttgaggagtatgtt 787
Score = 52.0 bits (26), Expect = 5e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 469 attttaaccattgattcttgcttctgggcacatgttgaagaggctctcatttcatgcaaa 528
|||||||| || ||||| || || |||||| |||| ||||| |||||| |||||||||||
Sbjct: 662 attttaacgatagattcatgtttttgggcatatgtggaagaagctctcctttcatgcaaa 721
Query: 529 tggttgaagg 538
||||||||
Sbjct: 722 gagttgaagg 731