Miyakogusa Predicted Gene

Lj2g3v1019940.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1019940.1 Non Chatacterized Hit- tr|I3T0V9|I3T0V9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,88.24,0.000002,seg,NULL,CUFF.35950.1
         (363 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC58546 UniRef100_A1W4P4 Cluster: 17 kDa surface antige...   129   1e-29
gnl|LJGI|TC66048 similar to UniRef100_A7Q1G5 Cluster: Chromosome...    56   2e-07
gnl|LJGI|TC60903 similar to UniRef100_A7Q1G5 Cluster: Chromosome...    56   2e-07
gnl|LJGI|TC57463 similar to UniRef100_A7Q1G5 Cluster: Chromosome...    56   2e-07

>gnl|LJGI|TC58546 UniRef100_A1W4P4 Cluster: 17 kDa surface antigen precursor; n=1;
            Acidovorax sp. JS42|Rep: 17 kDa surface antigen precursor
            - Acidovorax sp. (strain JS42), partial (16%)
          Length = 1062

 Score =  129 bits (65), Expect = 1e-29
 Identities = 83/89 (93%)
 Strand = Plus / Plus

                                                                        
Query: 190  ggcctcgtgatgctgtctatgtggggatccttggctagtttctgttgttcctggtccttg 249
            ||||||||||||   ||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 974  ggcctcgtgatgtcttctatgtggggatccttggctagttgctgtagttcctggtccttg 1033

                                         
Query: 250  agtcggttctactgctcttggttcccttc 278
            ||||| |||||||||||||||||||||||
Sbjct: 1034 agtcgtttctactgctcttggttcccttc 1062


>gnl|LJGI|TC66048 similar to UniRef100_A7Q1G5 Cluster: Chromosome chr7 scaffold_44,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr7 scaffold_44, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (75%)
          Length = 767

 Score = 56.0 bits (28), Expect = 2e-07
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                       
Query: 1   atggggatggagaaagtgaagagctttg 28
           ||||||||||||||||||||||||||||
Sbjct: 182 atggggatggagaaagtgaagagctttg 155


>gnl|LJGI|TC60903 similar to UniRef100_A7Q1G5 Cluster: Chromosome chr7 scaffold_44,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr7 scaffold_44, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (91%)
          Length = 866

 Score = 56.0 bits (28), Expect = 2e-07
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                       
Query: 1   atggggatggagaaagtgaagagctttg 28
           ||||||||||||||||||||||||||||
Sbjct: 164 atggggatggagaaagtgaagagctttg 137


>gnl|LJGI|TC57463 similar to UniRef100_A7Q1G5 Cluster: Chromosome chr7 scaffold_44,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr7 scaffold_44, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (92%)
          Length = 929

 Score = 56.0 bits (28), Expect = 2e-07
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                       
Query: 1   atggggatggagaaagtgaagagctttg 28
           ||||||||||||||||||||||||||||
Sbjct: 232 atggggatggagaaagtgaagagctttg 205