Miyakogusa Predicted Gene

Lj2g3v1019780.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1019780.2 Non Chatacterized Hit- tr|I1LWD8|I1LWD8_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,73.11,0,SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; seg,NULL; PC-Esterase,PC-Esterase;
PMR5N,PMR5 N-ter,CUFF.35930.2
         (1341 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW598585 homologue to UniRef100_A7PME4 Cluster: Chromos...   103   3e-21
gnl|LJGI|TC82403 weakly similar to UniRef100_A7PAJ8 Cluster: Chr...    52   9e-06

>gnl|LJGI|BW598585 homologue to UniRef100_A7PME4 Cluster: Chromosome chr14 scaffold_21,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr14 scaffold_21, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (23%)
          Length = 452

 Score =  103 bits (52), Expect = 3e-21
 Identities = 55/56 (98%)
 Strand = Plus / Plus

                                                                    
Query: 1254 gggttacaatgattgtactcattggtgtttgcctggtcctgttgatttgtggagtg 1309
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397  gggttataatgattgtactcattggtgtttgcctggtcctgttgatttgtggagtg 452


>gnl|LJGI|TC82403 weakly similar to UniRef100_A7PAJ8 Cluster: Chromosome chr14
           scaffold_9, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr14 scaffold_9, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (17%)
          Length = 563

 Score = 52.0 bits (26), Expect = 9e-06
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 421 gacagtgattttctcaattggaaatggaagcctgagcagtgtgagcttcc 470
           ||||| ||||||||| |||||| |||||| |||||  |||||||||||||
Sbjct: 365 gacagagattttctccattggagatggaaacctgatgagtgtgagcttcc 414