Miyakogusa Predicted Gene
- Lj2g3v1019760.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1019760.1 Non Chatacterized Hit- tr|G6BEC7|G6BEC7_CLODI
Putative uncharacterized protein OS=Clostridium
diffic,32.58,0.000000000000002,no description,NULL; seg,NULL;
LigT-like,RNA ligase/cyclic nucleotide phosphodiesterase;
2_5_RNA_lig,CUFF.35931.1
(550 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67015 similar to UniRef100_A7PME4 Cluster: Chromosome... 1090 0.0
gnl|LJGI|GO011281 homologue to UniRef100_A7PME4 Cluster: Chromos... 246 1e-64
gnl|LJGI|BW598585 homologue to UniRef100_A7PME4 Cluster: Chromos... 246 1e-64
gnl|LJGI|BW616096 homologue to UniRef100_A7PME4 Cluster: Chromos... 246 1e-64
gnl|LJGI|TC61198 homologue to UniRef100_A7PME4 Cluster: Chromoso... 246 1e-64
>gnl|LJGI|TC67015 similar to UniRef100_A7PME4 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (89%)
Length = 1098
Score = 1090 bits (550), Expect = 0.0
Identities = 550/550 (100%)
Strand = Plus / Plus
Query: 1 atgggttacgcaatcgaactctacatggacccagcactggagaaccaggttctcaaagcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 atgggttacgcaatcgaactctacatggacccagcactggagaaccaggttctcaaagcc 254
Query: 61 tggaacgtcatcgcacgccgtcagatcagcacacagctcatcgaaatggagtcacgccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 tggaacgtcatcgcacgccgtcagatcagcacacagctcatcgaaatggagtcacgccct 314
Query: 121 cacatcactctcttctccactccatttctagaaccttccaagctcgaaccactcctcaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 cacatcactctcttctccactccatttctagaaccttccaagctcgaaccactcctcaaa 374
Query: 181 accctctccacaaagcacgaccccttccctctctctttctcctccgtcggagcattcccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 accctctccacaaagcacgaccccttccctctctctttctcctccgtcggagcattcccc 434
Query: 241 ggcgaccacaacacgctgtttctctccccgacgccgtcgctctccctcctccattttcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 ggcgaccacaacacgctgtttctctccccgacgccgtcgctctccctcctccattttcag 494
Query: 301 tcgcagctctgtgacgcgattcggaaggaaggtgttgatgttccggatgagtacgcgctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 tcgcagctctgtgacgcgattcggaaggaaggtgttgatgttccggatgagtacgcgctt 554
Query: 361 ggttcgtggattccgttttgctccgtcgcgcatcaggttcccaaggcgaggatggcggag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 ggttcgtggattccgttttgctccgtcgcgcatcaggttcccaaggcgaggatggcggag 614
Query: 421 gcgttttctctgttgcgggacctgaagttgccggtttctggttacgcggtggatgtcgcg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 gcgttttctctgttgcgggacctgaagttgccggtttctggttacgcggtggatgtcgcg 674
Query: 481 gttgttcaattctctccggttcgtgagctgttctcgttcgtgcttggcaccactgctcct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 gttgttcaattctctccggttcgtgagctgttctcgttcgtgcttggcaccactgctcct 734
Query: 541 gattcctgag 550
||||||||||
Sbjct: 735 gattcctgag 744
>gnl|LJGI|GO011281 homologue to UniRef100_A7PME4 Cluster: Chromosome chr14
scaffold_21, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_21, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (23%)
Length = 734
Score = 246 bits (124), Expect = 1e-64
Identities = 127/128 (99%)
Strand = Plus / Plus
Query: 1 atgggttacgcaatcgaactctacatggacccagcactggagaaccaggttctcaaagcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 atgggttacgcaatcgaactctacatggacccagcactggagaaccaggttctcaaagcc 225
Query: 61 tggaacgtcatcgcacgccgtcagatcagcacacagctcatcgaaatggagtcacgccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 tggaacgtcatcgcacgccgtcagatcagcacacagctcatcgaaatggagtcacgccct 285
Query: 121 cacatcac 128
||| ||||
Sbjct: 286 cacctcac 293
>gnl|LJGI|BW598585 homologue to UniRef100_A7PME4 Cluster: Chromosome chr14
scaffold_21, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_21, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (23%)
Length = 452
Score = 246 bits (124), Expect = 1e-64
Identities = 127/128 (99%)
Strand = Plus / Plus
Query: 1 atgggttacgcaatcgaactctacatggacccagcactggagaaccaggttctcaaagcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 atgggttacgcaatcgaactctacatggacccagcactggagaaccaggttctcaaagcc 176
Query: 61 tggaacgtcatcgcacgccgtcagatcagcacacagctcatcgaaatggagtcacgccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 tggaacgtcatcgcacgccgtcagatcagcacacagctcatcgaaatggagtcacgccct 236
Query: 121 cacatcac 128
||| ||||
Sbjct: 237 cacctcac 244
>gnl|LJGI|BW616096 homologue to UniRef100_A7PME4 Cluster: Chromosome chr14
scaffold_21, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_21, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (23%)
Length = 476
Score = 246 bits (124), Expect = 1e-64
Identities = 127/128 (99%)
Strand = Plus / Plus
Query: 1 atgggttacgcaatcgaactctacatggacccagcactggagaaccaggttctcaaagcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 atgggttacgcaatcgaactctacatggacccagcactggagaaccaggttctcaaagcc 208
Query: 61 tggaacgtcatcgcacgccgtcagatcagcacacagctcatcgaaatggagtcacgccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 tggaacgtcatcgcacgccgtcagatcagcacacagctcatcgaaatggagtcacgccct 268
Query: 121 cacatcac 128
||| ||||
Sbjct: 269 cacctcac 276
>gnl|LJGI|TC61198 homologue to UniRef100_A7PME4 Cluster: Chromosome chr14
scaffold_21, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_21, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (23%)
Length = 752
Score = 246 bits (124), Expect = 1e-64
Identities = 127/128 (99%)
Strand = Plus / Plus
Query: 1 atgggttacgcaatcgaactctacatggacccagcactggagaaccaggttctcaaagcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 atgggttacgcaatcgaactctacatggacccagcactggagaaccaggttctcaaagcc 228
Query: 61 tggaacgtcatcgcacgccgtcagatcagcacacagctcatcgaaatggagtcacgccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 tggaacgtcatcgcacgccgtcagatcagcacacagctcatcgaaatggagtcacgccct 288
Query: 121 cacatcac 128
||| ||||
Sbjct: 289 cacctcac 296