Miyakogusa Predicted Gene
- Lj2g3v1018660.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1018660.1 Non Chatacterized Hit- tr|K4CBA7|K4CBA7_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,35.51,0.0001,no
description,Zinc finger, RING/FYVE/PHD-type; OS01G0736600 PROTEIN
(FRAGMENT),NULL; RING FINGER PR,CUFF.35922.1
(1162 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS361418 similar to UniRef100_A7Q2E7 Cluster: Chromosom... 1193 0.0
gnl|LJGI|FS334891 weakly similar to UniRef100_A7PD41 Cluster: Ch... 807 0.0
gnl|LJGI|TC71555 similar to UniRef100_A7PD41 Cluster: Chromosome... 222 4e-57
gnl|LJGI|GO008986 similar to UniRef100_A7PD41 Cluster: Chromosom... 125 7e-28
gnl|LJGI|TC63161 similar to UniRef100_A7PD41 Cluster: Chromosome... 52 8e-06
>gnl|LJGI|FS361418 similar to UniRef100_A7Q2E7 Cluster: Chromosome chr1 scaffold_46,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_46, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (51%)
Length = 757
Score = 1193 bits (602), Expect = 0.0
Identities = 608/610 (99%)
Strand = Plus / Minus
Query: 553 gcttttcatatcagttgtattgatacctggcttttgtcaaactccacttgccctctttgt 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 gcttttcatatcagttgtattgatacctggcttttgtcaaactccacttgccctctttgt 698
Query: 613 agaggaaccctcattgctccagggttttctattgataaccccatgtttgattttgatgat 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 agaggaaccctcattgctccagggttttctattgataaccccatgtttgattttgatgat 638
Query: 673 ctgagggatgatgatgatgtgggaaatagattcagttctagacagaaaacagttgttgtt 732
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 ctgagggaagatgatgatgtgggaaatagattcagttctagacagaaaacagttgttgtt 578
Query: 733 gaagaaactgtagagaaagagaaagagaaaggggttttccctgtgaggcttggtaaattc 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 gaagaaactgtagagaaagagaaagagaaaggggttttccctgtgaggcttggtaaattc 518
Query: 793 aaaaaggtggatgtggtggaggctggggagactaatggagttggagaaacaagtagcagt 852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 aaaaaggtggatgtggtggaggctggggagactaatggagttggagaaacaagtagcagt 458
Query: 853 aatttggatgcaagaaggtgttactcaatgggatcttaccagtatgtggttggcaattca 912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 aatttggatgcaagaaggtgttactcaatgggatcttaccagtatgtggttggcaattca 398
Query: 913 gaactcagggtagccttgaaccatccaagacttaccaaaggaacagaaaatgcagagagg 972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 gaactcagggtagccttgaaccatccaagacttaccaaaggaacagaaaatgcagagagg 338
Query: 973 ctttcagtggagggggatatggaggcaaagaagattagtagtgtcagtaaaggtgacagc 1032
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 ctttcagtggagggggatatggaggcaaagaagattagtagtgtcagtaaaggtgacagc 278
Query: 1033 ttttctatctccaaaatctggttgtggccaaagaagggaaatttacatggttctatggaa 1092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 ttttctatctccaaaatctggttgtggccaaagaagggaaatttacatggttctatggaa 218
Query: 1093 gctcaagtgggcatgtcatctcatcttaatactaacttgagggagatgaggaaaacagaa 1152
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 217 gctcaagtgggcatgtcatctcatcttaatactaacttgagggagatggggaaaacagaa 158
Query: 1153 ggggtatgaa 1162
||||||||||
Sbjct: 157 ggggtatgaa 148
>gnl|LJGI|FS334891 weakly similar to UniRef100_A7PD41 Cluster: Chromosome chr17
scaffold_12, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_12, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (20%)
Length = 794
Score = 807 bits (407), Expect = 0.0
Identities = 410/411 (99%)
Strand = Plus / Plus
Query: 1 atgtatcctatgtggttttttggccatacccatttgaagatggcttgggttaagcatcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 atgtatcctatgtggttttttggccatacccatttgaagatggcttgggttaagcatcaa 443
Query: 61 atccagcagagagatggttacttgaactaccctccaccagttttgtcttcatcttcttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 atccagcagagagatggttacttgaactaccctccaccagttttgtcttcatcttcttca 503
Query: 121 tccccataccctggttctgttttccataaggaaccaatgtcttcttcttattcaacacca 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 504 tccccataccctggttctgttttccataagtaaccaatgtcttcttcttattcaacacca 563
Query: 181 ccacctccttcatcatcttctggtactagaattagtccagctgttcttttcatcatagtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ccacctccttcatcatcttctggtactagaattagtccagctgttcttttcatcatagtg 623
Query: 241 gttttggctgttctgtttttcatttctggtctgctccacctgcttgttagattcctcata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gttttggctgttctgtttttcatttctggtctgctccacctgcttgttagattcctcata 683
Query: 301 aagcacccatcttcttctgcatctgctcaatccaacagacacaatgaaatatccacctct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aagcacccatcttcttctgcatctgctcaatccaacagacacaatgaaatatccacctct 743
Query: 361 gatgctcttcagagacagctgcagcagctcttccacctccatgattctggt 411
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gatgctcttcagagacagctgcagcagctcttccacctccatgattctggt 794
>gnl|LJGI|TC71555 similar to UniRef100_A7PD41 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (59%)
Length = 1842
Score = 222 bits (112), Expect = 4e-57
Identities = 338/415 (81%), Gaps = 15/415 (3%)
Strand = Plus / Plus
Query: 209 gaattagtccagctgttcttttcatcatagtggttttggctgttctgtttttcatttctg 268
|||||||||| || ||||||||| |||||||| || |||||||||||||||||||||| |
Sbjct: 708 gaattagtcctgcagttcttttcgtcatagtgattctggctgttctgtttttcatttcgg 767
Query: 269 gtctgctccacctgcttgttagattcctcataaagca---cccatcttcttctgcatctg 325
|| ||||||||||||||||||| || |||| |||| | |||||||||
Sbjct: 768 gtttgctccacctgcttgttaggtttctcacaaagaagaacccatcttca---------- 817
Query: 326 ctcaatccaacagacacaatgaaatatccacctctgatgctcttcagagacagctgcagc 385
||||| | || ||| ||||| || | ||||||||||||| | ||||||||||| |
Sbjct: 818 --caatctgataggcaccgcgaaatttctaactctgatgctcttgaaagacagctgcaac 875
Query: 386 agctcttccacctccatgattctggtttagatcaagctttcattgatgcacttcctgttt 445
|||| ||||| |||||||| | |||||| || ||||||||||||||||||||||||||||
Sbjct: 876 agcttttccatctccatgactttggtttggaccaagctttcattgatgcacttcctgttt 935
Query: 446 ttcagttcaaggagattgtgggtatgaaagagcaatttgactgtgctgtttgcttgtgtg 505
| |||| || ||||| ||| |||| |||| || || ||||||||||| | || |
Sbjct: 936 tccagtataaagagataacggggctgaaggagcccttagattgtgctgtttgtctttgcg 995
Query: 506 agtttactgaaaaggataagctcaggttgcttcctatgtgcagccatgcttttcatatca 565
||||| | ||||||||||| ||||||||||| ||| |||||||||||||| |||||||||
Sbjct: 996 agttttccgaaaaggataatctcaggttgctccctgtgtgcagccatgctcttcatatca 1055
Query: 566 gttgtattgatacctggcttttgtcaaactccacttgccctctttgtagaggaac 620
|||||| ||||| ||||||||||||||||| || ||||| |||||||| |||||
Sbjct: 1056 attgtatagatacatggcttttgtcaaactcaacatgcccactttgtaggggaac 1110
Score = 103 bits (52), Expect = 2e-21
Identities = 73/80 (91%)
Strand = Plus / Plus
Query: 835 ggagaaacaagtagcagtaatttggatgcaagaaggtgttactcaatgggatcttaccag 894
||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1319 ggagagactagtagcagtaatttggatgcaagaagatgttactcaatgggatcttaccaa 1378
Query: 895 tatgtggttggcaattcaga 914
||||| ||||||| |||||
Sbjct: 1379 tatgtccttggcaaatcaga 1398
Score = 75.8 bits (38), Expect = 5e-13
Identities = 83/98 (84%)
Strand = Plus / Plus
Query: 973 ctttcagtggagggggatatggaggcaaagaagattagtagtgtcagtaaaggtgacagc 1032
||||| || ||||| ||||| || |||||||||||||| || || |||||||||| |||
Sbjct: 1475 ctttctgttgagggtgatattgaagcaaagaagattagaagagttggtaaaggtgagagc 1534
Query: 1033 ttttctatctccaaaatctggttgtggccaaagaaggg 1070
| |||| | |||||||||||||||||| || |||||||
Sbjct: 1535 tattctgtttccaaaatctggttgtggtcagagaaggg 1572
>gnl|LJGI|GO008986 similar to UniRef100_A7PD41 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 675
Score = 125 bits (63), Expect = 7e-28
Identities = 199/246 (80%), Gaps = 15/246 (6%)
Strand = Plus / Plus
Query: 209 gaattagtccagctgttcttttcatcatagtggttttggctgttctgtttttcatttctg 268
|||||||||| || ||||||||| |||||||| || |||||||||||||||||||||| |
Sbjct: 432 gaattagtcctgcagttcttttcgtcatagtgattctggctgttctgtttttcatttcgg 491
Query: 269 gtctgctccacctgcttgttagattcctcata---aagcacccatcttcttctgcatctg 325
|| ||||||||||||||||||| || |||| | ||| |||||||||
Sbjct: 492 gtttgctccacctgcttgttaggtttctcacaaagaagaacccatctt------------ 539
Query: 326 ctcaatccaacagacacaatgaaatatccacctctgatgctcttcagagacagctgcagc 385
| ||||| | || ||| ||||| || | ||||||||||||| | ||||||||||| |
Sbjct: 540 cacaatctgataggcaccgcgaaatttctaactctgatgctcttgaaagacagctgcaac 599
Query: 386 agctcttccacctccatgattctggtttagatcaagctttcattgatgcacttcctgttt 445
|||| ||||| |||||||| | |||||| || ||||||||||||||||||||||||||||
Sbjct: 600 agcttttccatctccatgactttggtttggaccaagctttcattgatgcacttcctgttt 659
Query: 446 ttcagt 451
| ||||
Sbjct: 660 tccagt 665
>gnl|LJGI|TC63161 similar to UniRef100_A7PD41 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (60%)
Length = 1033
Score = 52.0 bits (26), Expect = 8e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 851 gtaatttggatgcaagaaggtgttactcaatgggatcttaccagtatgtggttg 904
||||||||||||||||||| || || |||||||| |||| |||||||| ||||
Sbjct: 694 gtaatttggatgcaagaagatgctattcaatgggttcttttcagtatgttgttg 747