Miyakogusa Predicted Gene
- Lj2g3v1016630.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1016630.1 Non Chatacterized Hit- tr|I1K663|I1K663_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.35574
PE,78.46,0,GPROTEINBRPT,G-protein beta WD-40 repeat; WD40 repeats,WD40
repeat; no description,WD40/YVTN
repeat-,NODE_73595_length_2779_cov_45.820797.path2.1
(2121 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS343233 967 0.0
gnl|LJGI|BP056838 weakly similar to UniRef100_A7QF05 Cluster: Ch... 317 2e-85
gnl|LJGI|TC67712 homologue to UniRef100_A7PDZ8 Cluster: Chromoso... 204 2e-51
>gnl|LJGI|FS343233
Length = 732
Score = 967 bits (488), Expect = 0.0
Identities = 488/488 (100%)
Strand = Plus / Plus
Query: 1 atggagggttttggtgaggatcaattctatgacacgcgtgaggaactgtgttctgtgtct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 atggagggttttggtgaggatcaattctatgacacgcgtgaggaactgtgttctgtgtct 304
Query: 61 gatttgggttcagattgttcagggtcagctgatgaatctagttctggtaatggatatgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 gatttgggttcagattgttcagggtcagctgatgaatctagttctggtaatggatatgtt 364
Query: 121 accaggtaccaggtttggacaaacaaccttgaaagcgttcaccagcgacgcctcaatttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 accaggtaccaggtttggacaaacaaccttgaaagcgttcaccagcgacgcctcaatttc 424
Query: 181 ctgagatggatgggttttgaatctgatgtgaattcaatgaaaggggaagagttggcagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ctgagatggatgggttttgaatctgatgtgaattcaatgaaaggggaagagttggcagat 484
Query: 241 ccgtgttatggagttgaccgagtcacagccaccagtggggctgtgctgagaacttcagac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 ccgtgttatggagttgaccgagtcacagccaccagtggggctgtgctgagaacttcagac 544
Query: 301 cagattgttttgtcagctgaggattcgagctcgttgggaaaccgcggtgatgcggctaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 cagattgttttgtcagctgaggattcgagctcgttgggaaaccgcggtgatgcggctaat 604
Query: 361 ttggattgtatgataaagaatttggatgatggaacacagtatgttgtggataaactgggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 ttggattgtatgataaagaatttggatgatggaacacagtatgttgtggataaactgggt 664
Query: 421 caagatgggacgcttagtaccctgcgtgttctcgggtcgaatcaattgatcagcttggaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 caagatgggacgcttagtaccctgcgtgttctcgggtcgaatcaattgatcagcttggaa 724
Query: 481 gattttca 488
||||||||
Sbjct: 725 gattttca 732
>gnl|LJGI|BP056838 weakly similar to UniRef100_A7QF05 Cluster: Chromosome chr16
scaffold_86, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr16 scaffold_86, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (5%)
Length = 492
Score = 317 bits (160), Expect = 2e-85
Identities = 160/160 (100%)
Strand = Plus / Minus
Query: 1962 ggttgcttctcctaaaatgtgtaaatcagagtacaagttcttgagaagtgcttgcaaggg 2021
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ggttgcttctcctaaaatgtgtaaatcagagtacaagttcttgagaagtgcttgcaaggg 433
Query: 2022 aatgtctaattctcacctttggggccaagtaattgtaacagcaggaaaggatggacacat 2081
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 aatgtctaattctcacctttggggccaagtaattgtaacagcaggaaaggatggacacat 373
Query: 2082 aagagtgtaccagaattacgggttacctgttcgtgtttga 2121
||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 aagagtgtaccagaattacgggttacctgttcgtgtttga 333
>gnl|LJGI|TC67712 homologue to UniRef100_A7PDZ8 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (36%)
Length = 903
Score = 204 bits (103), Expect = 2e-51
Identities = 157/174 (90%), Gaps = 2/174 (1%)
Strand = Plus / Plus
Query: 1499 agttttcaccaagtgatccaagcaaattattggttgcttctgctgactcacatgtctgta 1558
|||||||||||||||| |||| |||||||||||| |||||||||||||||||||||| ||
Sbjct: 442 agttttcaccaagtgacccaaccaaattattggtggcttctgctgactcacatgtcttta 501
Query: 1559 tactttctggagttgatgtcatctacaaattcaaaggcctaagaagtgctggtcagatgc 1618
||| ||| || | |||||||||||||||||| ||||||||| || ||| ||||||||||
Sbjct: 502 tacgttccagaatggatgtcatctacaaattcgaaggcctaaaaattgcaggtcagatgc 561
Query: 1619 aagcttccttcacctctgatgggaaacatattgtctcagttagtgagggttcaa 1672
||||||||||||||||||||||||||| | |||||||||||| ||||||||||
Sbjct: 562 aagcttccttcacctctgatgggaaac--aatgtctcagttagcgagggttcaa 613