Miyakogusa Predicted Gene

Lj2g3v1015600.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1015600.1 Non Chatacterized Hit- tr|I1N5U5|I1N5U5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.4979
PE=,89.23,0,seg,NULL; kup: potassium uptake protein,K+ potassium
transporter; OSMOTIC STRESS POTASSIUM TRANSPORT,CUFF.35919.1
         (2331 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS342385 homologue to UniRef100_A7Q2E3 Cluster: Chromos...   276   6e-73

>gnl|LJGI|FS342385 homologue to UniRef100_A7Q2E3 Cluster: Chromosome chr1 scaffold_46,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_46, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (18%)
          Length = 573

 Score =  276 bits (139), Expect = 6e-73
 Identities = 238/271 (87%)
 Strand = Plus / Plus

                                                                       
Query: 46  tcatggaagacagtgttgattctggcatatcagagcttgggggttgtctatggagacttg 105
           ||||||| ||||||||| | | | || || ||||||||||| || ||||||||||| |||
Sbjct: 1   tcatggaggacagtgttaactttagcttaccagagcttgggagtagtctatggagatttg 60

                                                                       
Query: 106 agcacttccccactctacgtttacaagagcacctttgctgaggacattcagcattcagaa 165
           ||||| |||||||| || |||||||||||||| |||||||||||||||||||||||||| 
Sbjct: 61  agcacatccccactttatgtttacaagagcacttttgctgaggacattcagcattcagat 120

                                                                       
Query: 166 accaatgaagaaatctatggagttttgtcctttgtgttctggactttgacactgattcct 225
           |||||||||||||| |||||||| ||||| ||||||||||||||| | ||| ||||||| 
Sbjct: 121 accaatgaagaaatatatggagtcttgtcttttgtgttctggactcttacattgattcca 180

                                                                       
Query: 226 ctgttcaagtatgtgttcattgtgctccgagctgatgacaatggtgaaggagggactttc 285
           ||  | ||||||||||||||||||||| |||| || |||||||| |||||||| ||||| 
Sbjct: 181 ctcctaaagtatgtgttcattgtgctcagagcagacgacaatggcgaaggaggaactttt 240

                                          
Query: 286 gctctgtactcgtcgctttgccggcatgccc 316
           ||||||||||||| ||| |||||||||||||
Sbjct: 241 gctctgtactcgttgctgtgccggcatgccc 271



 Score =  194 bits (98), Expect = 2e-48
 Identities = 134/146 (91%)
 Strand = Plus / Plus

                                                                       
Query: 403 aatgttgggtcggggttgaaatctttgttggagaaacatagggtgttgcagagggttctg 462
           ||||||||||||| ||||||||||||||||||||| || |||||| |||||||||| || 
Sbjct: 424 aatgttgggtcggtgttgaaatctttgttggagaagcacagggtgctgcagagggtcctt 483

                                                                       
Query: 463 cttgttctggctttgattgggacttgcatggttattggagatggtgttctaacaccagca 522
           ||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||| |||
Sbjct: 484 cttgttctggctttgatagggacttgcatggtcattggtgatggtgttctaacacctgca 543

                                     
Query: 523 atttctgttttctctgcagtgtcagg 548
            |||||||||||||||| ||||||||
Sbjct: 544 ctttctgttttctctgctgtgtcagg 569