Miyakogusa Predicted Gene
- Lj2g3v1014320.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1014320.1 Non Chatacterized Hit- tr|D8UIB6|D8UIB6_VOLCA
Putative uncharacterized protein OS=Volvox carteri GN=,38.33,4e-18,no
description,NULL; seg,NULL; coiled-coil,NULL; Oxygen-evolving enhancer
protein 3,,PsbQ-like domai,CUFF.35902.1
(792 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62174 similar to UniRef100_A7PMB3 Cluster: Chromosome... 1409 0.0
gnl|LJGI|TC77797 similar to UniRef100_Q533R9 Cluster: MADS box p... 82 6e-15
gnl|LJGI|FS330543 similar to UniRef100_A7PBM7 Cluster: Chromosom... 58 9e-08
gnl|LJGI|TC59011 similar to UniRef100_A7PBM7 Cluster: Chromosome... 58 9e-08
>gnl|LJGI|TC62174 similar to UniRef100_A7PMB3 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (56%)
Length = 955
Score = 1409 bits (711), Expect = 0.0
Identities = 711/711 (100%)
Strand = Plus / Plus
Query: 78 atgtaatctaagctcaacttccatttccactgtctctttctctgtctcacatgagctttc 137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 atgtaatctaagctcaacttccatttccactgtctctttctctgtctcacatgagctttc 62
Query: 138 ttctctgatttcaatggcagccatcaccccctgtcactacttcaatacccactctacacg 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 ttctctgatttcaatggcagccatcaccccctgtcactacttcaatacccactctacacg 122
Query: 198 tctaacctaccctcttcctcataccaatgctagacttcgtggtttcactgctcgttgctc 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 tctaacctaccctcttcctcataccaatgctagacttcgtggtttcactgctcgttgctc 182
Query: 258 ttaccaaccaccccaacattctcagtttcagaacaaacatgaagggaggtcattttcttt 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 ttaccaaccaccccaacattctcagtttcagaacaaacatgaagggaggtcattttcttt 242
Query: 318 aaagcattgtgcggtatcaatagcattagcagttggattagtaactggagttcctacatt 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 aaagcattgtgcggtatcaatagcattagcagttggattagtaactggagttcctacatt 302
Query: 378 ggggtggcctaccgatgccaatgcagctagcccggtgttatctgatttgtctgtattgat 437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ggggtggcctaccgatgccaatgcagctagcccggtgttatctgatttgtctgtattgat 362
Query: 438 atccggacccccaatcaaggaccctggggctctgttgagatatgctcttcctattgacaa 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 atccggacccccaatcaaggaccctggggctctgttgagatatgctcttcctattgacaa 422
Query: 498 taaggcagttagagaagtgcagaaaccacttgaagatattacagatagtctcaagattgc 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 taaggcagttagagaagtgcagaaaccacttgaagatattacagatagtctcaagattgc 482
Query: 558 tggagtcaaggcacttgactctgtggaaaggaatacaagacaggcttctcgagccctcac 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 tggagtcaaggcacttgactctgtggaaaggaatacaagacaggcttctcgagccctcac 542
Query: 618 gcaagggaagactctaattatatcaggtttagcagaatctaagaaagaacatggagttga 677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 gcaagggaagactctaattatatcaggtttagcagaatctaagaaagaacatggagttga 602
Query: 678 gctgcttaataagctggaagctggtatggatgagcttgaactgataattcaggatagaaa 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 gctgcttaataagctggaagctggtatggatgagcttgaactgataattcaggatagaaa 662
Query: 738 tcgagatgctgttggaccaaaacaaaaagagcttcttcaatatgttggagg 788
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 tcgagatgctgttggaccaaaacaaaaagagcttcttcaatatgttggagg 713
>gnl|LJGI|TC77797 similar to UniRef100_Q533R9 Cluster: MADS box protein AGL1; n=1;
Lotus japonicus|Rep: MADS box protein AGL1 - Lotus
japonicus, partial (12%)
Length = 1039
Score = 81.8 bits (41), Expect = 6e-15
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 675 tgagctgcttaataagctggaagctggtatggatgagcttgaact 719
|||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 338 tgagctgcttaataagctggaagctggtatggatgaccttgaact 294
>gnl|LJGI|FS330543 similar to UniRef100_A7PBM7 Cluster: Chromosome chr16 scaffold_10,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_10, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 825
Score = 58.0 bits (29), Expect = 9e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 675 tgagctgcttaataagctggaagctggta 703
|||||||||||||||||||||||||||||
Sbjct: 345 tgagctgcttaataagctggaagctggta 317
>gnl|LJGI|TC59011 similar to UniRef100_A7PBM7 Cluster: Chromosome chr16 scaffold_10,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_10, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 787
Score = 58.0 bits (29), Expect = 9e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 675 tgagctgcttaataagctggaagctggta 703
|||||||||||||||||||||||||||||
Sbjct: 292 tgagctgcttaataagctggaagctggta 264