Miyakogusa Predicted Gene
- Lj2g3v1002560.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1002560.1 Non Chatacterized Hit- tr|I1N5P9|I1N5P9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.52029 PE,88.69,0,no
description,ATPase, P-type, cytoplasmic transduction domain A; no
description,ATPase, P-type, cy,CUFF.35847.1
(2664 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS351667 similar to UniRef100_A7P6M9 Cluster: Chromosom... 76 1e-12
gnl|LJGI|TC79902 similar to UniRef100_A7P2Z2 Cluster: Chromosome... 68 3e-10
gnl|LJGI|TC73106 similar to UniRef100_A7QX90 Cluster: Chromosome... 56 1e-06
gnl|LJGI|FS360787 similar to UniRef100_Q0DLI5 Cluster: Os05g0100... 54 5e-06
>gnl|LJGI|FS351667 similar to UniRef100_A7P6M9 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (24%)
Length = 793
Score = 75.8 bits (38), Expect = 1e-12
Identities = 113/138 (81%)
Strand = Plus / Minus
Query: 2065 atggaaagagatttgatacttcttggtgctacggcagttgaggatagactgcaaaagggg 2124
||||||| ||| ||||| ||| |||| || || || ||||| || | |||||| || |||
Sbjct: 215 atggaaaaagagttgattcttgttggagccactgctgttgaagacaaactgcagaaaggg 156
Query: 2125 gtacctgaatgtattgaaaagcttgctcaagcaggaatcaagttatgggtattgactggg 2184
|| || |||||||||| || ||||||||||| || ||||| | ||||||||||| |||
Sbjct: 155 gttccccaatgtattgataaacttgctcaagctggtctcaagatctgggtattgacgggg 96
Query: 2185 gacaagatggaaactgca 2202
|| |||||||||||||||
Sbjct: 95 gataagatggaaactgca 78
>gnl|LJGI|TC79902 similar to UniRef100_A7P2Z2 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (29%)
Length = 1142
Score = 67.9 bits (34), Expect = 3e-10
Identities = 133/166 (80%)
Strand = Plus / Plus
Query: 2074 gatttgatacttcttggtgctacggcagttgaggatagactgcaaaagggggtacctgaa 2133
||||| || |||||||||||||| |||||||| || | ||| ||| | ||||| ||||||
Sbjct: 343 gatttaattcttcttggtgctactgcagttgaagacaaactacaagacggggttcctgaa 402
Query: 2134 tgtattgaaaagcttgctcaagcaggaatcaagttatgggtattgactggggacaagatg 2193
|||||||| || || || || || || || ||| ||||||| |||||||| || || |||
Sbjct: 403 tgtattgacaaactagcgcaggctgggattaagctatgggttttgactggtgataaaatg 462
Query: 2194 gaaactgcagttaacatagggtatgcatgtagtttacttagacaag 2239
|| || ||| |||| || || | || ||||||||||| |||||||
Sbjct: 463 gagacagcaattaatattggattcgcttgtagtttactcagacaag 508
>gnl|LJGI|TC73106 similar to UniRef100_A7QX90 Cluster: Chromosome undetermined
scaffold_215, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_215,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (14%)
Length = 1300
Score = 56.0 bits (28), Expect = 1e-06
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 226 tttgagcagttcagaagggttgcaaatatctactttctta 265
||||| |||||||| |||||||| ||||||||||||||||
Sbjct: 324 tttgaacagttcaggagggttgctaatatctactttctta 363
>gnl|LJGI|FS360787 similar to UniRef100_Q0DLI5 Cluster: Os05g0100600 protein; n=1; Oryza
sativa Japonica Group|Rep: Os05g0100600 protein - Oryza
sativa subsp. japonica (Rice), partial (31%)
Length = 754
Score = 54.0 bits (27), Expect = 5e-06
Identities = 93/115 (80%)
Strand = Plus / Minus
Query: 1178 atgaagaaacagataggccagctcgtgcacgcacatctaatttgaatgaggaacttggtc 1237
||||||||||| | | |||||| ||||||||| || || ||||||||||||||||| |
Sbjct: 754 atgaagaaacaaacaaaccagcttatgcacgcacttcaaacttgaatgaggaacttggcc 695
Query: 1238 aggttgatacaatattgtccgacaagactggtactttgacatgtaactctatgga 1292
| ||||| || ||| | || ||||| ||||| ||| |||| || ||||| |||||
Sbjct: 694 aagttgacactatactttctgacaaaactggaactctgacctgcaactcaatgga 640