Miyakogusa Predicted Gene

Lj2g3v0945240.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v0945240.1 Non Chatacterized Hit- tr|I3SKX4|I3SKX4_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4
SV=1,52.88,2e-18,seg,NULL,CUFF.35821.1
         (322 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC57657 similar to UniRef100_Q9FI64 Cluster: Genomic DN...   638   0.0  

>gnl|LJGI|TC57657 similar to UniRef100_Q9FI64 Cluster: Genomic DNA, chromosome 5, TAC
           clone:K21I16; n=1; Arabidopsis thaliana|Rep: Genomic
           DNA, chromosome 5, TAC clone:K21I16 - Arabidopsis
           thaliana (Mouse-ear cress), partial (50%)
          Length = 850

 Score =  638 bits (322), Expect = 0.0
 Identities = 322/322 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggggttttcgaagaaggcgcaagcagagactggtttggaatctgaagccaagaaatgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atggggttttcgaagaaggcgcaagcagagactggtttggaatctgaagccaagaaatgg 260

                                                                       
Query: 61  gtaattgctggaatttcagttcggtctctgaagccgataaacaccaagcagagggggaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtaattgctggaatttcagttcggtctctgaagccgataaacaccaagcagagggggaaa 320

                                                                       
Query: 121 gagaatgactgcgttgaagaggaggaggaggaggcagggcgttcgacgacgccgacggcg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagaatgactgcgttgaagaggaggaggaggaggcagggcgttcgacgacgccgacggcg 380

                                                                       
Query: 181 aaggaggctaggataccggagaagctgcggtgccctccagcgccgaggaagagacgacct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaggaggctaggataccggagaagctgcggtgccctccagcgccgaggaagagacgacct 440

                                                                       
Query: 241 tcgaggtgcaacaatttcagtggtgtgagggagttcttcactcctccagatttggaaact 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcgaggtgcaacaatttcagtggtgtgagggagttcttcactcctccagatttggaaact 500

                                 
Query: 301 gtgttcaagtgccatgtatgag 322
           ||||||||||||||||||||||
Sbjct: 501 gtgttcaagtgccatgtatgag 522