Miyakogusa Predicted Gene
- Lj2g3v0932920.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0932920.1 Non Chatacterized Hit- tr|G5DXD8|G5DXD8_SILLA
Putative uncharacterized protein (Fragment) OS=Silene
,31.67,4e-18,coiled-coil,NULL; DUF1421,Protein of unknown function
DUF1421; seg,NULL; SUBFAMILY NOT NAMED,NULL; F,CUFF.35825.1
(1554 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64322 similar to UniRef100_A7PM52 Cluster: Chromosome... 2633 0.0
>gnl|LJGI|TC64322 similar to UniRef100_A7PM52 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (42%)
Length = 2179
Score = 2633 bits (1328), Expect = 0.0
Identities = 1351/1361 (99%)
Strand = Plus / Plus
Query: 194 gagttgttgaagatgaaggccgtggtggcggcaatggaatcaacaccgatgacatcgttc 253
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 315 gagttgttgaagatgaaggccgtggtggcggcaatggaatcaacactgatgacatcgttc 374
Query: 254 ccagctacgatttcaaaccgattcgcccactcgctgcttctaattacgattctgccccta 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ccagctacgatttcaaaccgattcgcccactcgctgcttctaattacgattctgccccta 434
Query: 314 atctcagtgccgcattttccaggccttggaattctgattccaaccaacccatcactaaaa 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 atctcagtgccgcattttccaggccttggaattctgattccaaccaacccatcactaaaa 494
Query: 374 gttacagttctctggattctattgaacctttgaaggtcaatgtagaaaaggaccgaaatg 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 gttacagttctctggattctattgaacctttgaaggtcaatgtagaaaaggaccgaaatg 554
Query: 434 cttttgatcctcaaattttgtctgagatagatcagaccgtgaagaaacatacggaaaatt 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 cttttgatcctcaaattttgtctgagatagatcagaccgtgaagaaacatacggaaaatt 614
Query: 494 tgcttcatgttctggaaggtgttagtgcacggttaacacaactagaaaccagaacacgcc 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 tgcttcatgttctggaaggtgttagtgcacggttaacacaactagaaaccagaacacgcc 674
Query: 554 atcttgagaattctatggatgatttgaaggtatctgttggaaataatcatggtagcactg 613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 atcttgagaattctatggatgatttgaaggtatctgttggaaataatcatggtagcactg 734
Query: 614 atggaaaatttaggcagctggagaatattcttcgagaggtgcaatcaggggtgcagacta 673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 atggaaaatttaggcagctggagaatattcttcgagaggtgcaatcaggggtgcagacta 794
Query: 674 tcaaggacaagcaagatatagtgcaggctcagctgcaattggcaaagctacaagtatcca 733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 tcaaggacaagcaagatatagtgcaggctcagctgcaattggcaaagctacaagtatcca 854
Query: 734 agacagatcaacaatctgaaactcaaactagtgcaggtacagatcctgtccagcaagctg 793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 agacagatcaacaatctgaaactcaaactagtgcaggtacagatcctgtccagcaagctg 914
Query: 794 catctgctcccctgcaatctcaacaacagtttccttcccctgttaatctcccacagtcta 853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 915 catctgctcccctgcaatctcaacaacagtttccttcccctgttaatctcccacagtcta 974
Query: 854 ttcctgtggttcctccccctaatgcacctcctcaactgnnnnnnnaacagggtttgccac 913
|||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 975 ttcctgtggttcctccccctaatgcacctcctcaactgcccccccaacagggtttgccac 1034
Query: 914 cttcatttccacctccaaatcaattctctcagacccaaatcccagctgttcctcagagag 973
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1035 cttcatttccacctccaaatcaattctctcagacccaaatcccagctgttcctcagagag 1094
Query: 974 atccatacttcccaccacctgttcaatctcaggaaaccccaaatcagcaataccaacagc 1033
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1095 atccatacttcccaccacctgttcaatctcaggaaaccccaaatcagcaataccaacagc 1154
Query: 1034 ctttagcaccgcagccacatcctcaacctggggcacctccgcatcagcaatatcagcaga 1093
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1155 ctttagcaccgcagccacatcctcaacctggggcacctccgcatcagcaatatcagcaga 1214
Query: 1094 cccctcatccccagtattctcagccagcacctccccagcatcagccaccaattccttcca 1153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1215 cccctcatccccagtattctcagccagcacctccccagcatcagccaccaattccttcca 1274
Query: 1154 taaacccgcctcaactacaatcttcactgggtcaccatgtagaggaaccaccttatgttc 1213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1275 taaacccgcctcaactacaatcttcactgggtcaccatgtagaggaaccaccttatgttc 1334
Query: 1214 cttctcagacttaccctcccaatctccgccagccaccatctcagccacctagtggacctc 1273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1335 cttctcagacttaccctcccaatctccgccagccaccatctcagccacctagtggacctc 1394
Query: 1274 ctgctcctccttcccagcagttctatgggacagcaccccatgcatatgaaccaccaccaa 1333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1395 ctgctcctccttcccagcagttctatgggacagcaccccatgcatatgaaccaccaccaa 1454
Query: 1334 gtaggtctggctcaggttactcttctggatatggttcatcatccgggccggctgagcaat 1393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1455 gtaggtctggctcaggttactcttctggatatggttcatcatccgggccggctgagcaat 1514
Query: 1394 atcgttatggtggaccacctcagtatggtggtaaaccaccgcaactacccactgcttcat 1453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1515 atcgttatggtggaccacctcagtatggtggtaaaccaccgcaactacccactgcttcat 1574
Query: 1454 tggctgtaagtggtggaagtggttatccacaactcccaactgctcgggtactcccacaag 1513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1575 tggctgtaagtggtggaagtggttatccacaactcccaactgctcgggtactcccacaag 1634
Query: 1514 ctatacctacagcttctgcagtaagtgggggtggttaaggt 1554
|||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 1635 ctatacctacagcttctgcagtaagtggtggtggttcaggt 1675
Score = 222 bits (112), Expect = 5e-57
Identities = 112/112 (100%)
Strand = Plus / Plus
Query: 1 atgaatacgacgccgttcatggacaagcagataatggatctcactcatggatcttcttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 atgaatacgacgccgttcatggacaagcagataatggatctcactcatggatcttcttct 181
Query: 61 cctcagcagcaatcacacaccaacgacttcatcgacctcatgaagcatccac 112
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 cctcagcagcaatcacacaccaacgacttcatcgacctcatgaagcatccac 233