Miyakogusa Predicted Gene
- Lj2g3v0932880.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0932880.1 tr|B2ZF65|B2ZF65_SOYBN Raffionse synthase 3
OS=Glycine max GN=RS3 PE=4 SV=1,77.39,0,SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL; no description,Aldolase-type TIM barrel;
Raffinose_,CUFF.35795.1
(1815 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71470 weakly similar to UniRef100_Q9ZT62 Cluster: Raf... 781 0.0
gnl|LJGI|AV421962 similar to UniRef100_Q8VWN6 Cluster: Raffinose... 757 0.0
gnl|LJGI|AV424385 weakly similar to UniRef100_A7PM53 Cluster: Ch... 613 e-174
gnl|LJGI|TC78101 similar to UniRef100_Q8RX87 Cluster: AT5g20250/... 62 1e-08
>gnl|LJGI|TC71470 weakly similar to UniRef100_Q9ZT62 Cluster: Raffinose synthase;
n=1; Cucumis sativus|Rep: Raffinose synthase - Cucumis
sativus (Cucumber), partial (8%)
Length = 691
Score = 781 bits (394), Expect = 0.0
Identities = 394/394 (100%)
Strand = Plus / Plus
Query: 1 atggctcccaatttgagcaaacaatcccccaccatcaccaaacacatgaatggcttcaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 atggctcccaatttgagcaaacaatcccccaccatcaccaaacacatgaatggcttcaac 357
Query: 61 ccttcacccttcacccttgaagagtcaaccctaaaagtcaacggccacgtcatcctctcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 ccttcacccttcacccttgaagagtcaaccctaaaagtcaacggccacgtcatcctctcc 417
Query: 121 gatgttcccaaaaacatcaccaccaccccatgcacctactcctcctccacaacctccacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 gatgttcccaaaaacatcaccaccaccccatgcacctactcctcctccacaacctccacc 477
Query: 181 ggctgcttcctcggcttccacgccaccaagccccacagccgccacgtggcacctctgggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 ggctgcttcctcggcttccacgccaccaagccccacagccgccacgtggcacctctgggg 537
Query: 241 aaactcaaaaacatcaacttcaccagcctcttccggttcaaggtctggtggaccaccctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 aaactcaaaaacatcaacttcaccagcctcttccggttcaaggtctggtggaccaccctc 597
Query: 301 tgggtcgggtcaaacggccgagacctcgaaaccgaaacccagttcctcatgctgaagaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 tgggtcgggtcaaacggccgagacctcgaaaccgaaacccagttcctcatgctgaagaat 657
Query: 361 tcggaccctgaaccgggttccgattcgggttcgg 394
||||||||||||||||||||||||||||||||||
Sbjct: 658 tcggaccctgaaccgggttccgattcgggttcgg 691
>gnl|LJGI|AV421962 similar to UniRef100_Q8VWN6 Cluster: Raffinose synthase; n=1; Pisum
sativum|Rep: Raffinose synthase - Pisum sativum (Garden
pea), partial (20%)
Length = 489
Score = 757 bits (382), Expect = 0.0
Identities = 382/382 (100%)
Strand = Plus / Plus
Query: 1434 cagtggtgacccaaatggcacattttggctgcaagggtgtcacatggtgcactgtgccta 1493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagtggtgacccaaatggcacattttggctgcaagggtgtcacatggtgcactgtgccta 60
Query: 1494 caacagtttgtggatggggaacttcatccacccagattgggacatgttccagtccacaca 1553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caacagtttgtggatggggaacttcatccacccagattgggacatgttccagtccacaca 120
Query: 1554 cccttgtgctgcttttcatgctgcctcaagagccatttctggtggaccaatctatgtcag 1613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cccttgtgctgcttttcatgctgcctcaagagccatttctggtggaccaatctatgtcag 180
Query: 1614 tgacaaagttgggagtcacaactttgaactcctcaagactttggtcttgcctgatgggtg 1673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgacaaagttgggagtcacaactttgaactcctcaagactttggtcttgcctgatgggtg 240
Query: 1674 catcctgagatgtgagcactatgcactccccactaaggactgtctctttgctgatcctct 1733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 catcctgagatgtgagcactatgcactccccactaaggactgtctctttgctgatcctct 300
Query: 1734 ccatgatggcaaaacaatgctcaagatatggaacctcaacaagtacactggagttcttgg 1793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccatgatggcaaaacaatgctcaagatatggaacctcaacaagtacactggagttcttgg 360
Query: 1794 ggtatttaactgccaaggagga 1815
||||||||||||||||||||||
Sbjct: 361 ggtatttaactgccaaggagga 382
>gnl|LJGI|AV424385 weakly similar to UniRef100_A7PM53 Cluster: Chromosome chr14
scaffold_21, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_21, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (13%)
Length = 309
Score = 613 bits (309), Expect = e-174
Identities = 309/309 (100%)
Strand = Plus / Plus
Query: 1015 aggcctggtgtggaggggttgccggaggcggtggtggagactcctctgttgtcgccgggg 1074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggcctggtgtggaggggttgccggaggcggtggtggagactcctctgttgtcgccgggg 60
Query: 1075 ttaaaggggaccatggaggatttggcggtggataagatggtgagtcatggggttggagtg 1134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttaaaggggaccatggaggatttggcggtggataagatggtgagtcatggggttggagtg 120
Query: 1135 gtcctgcctcagtttgtggatttgatgtatgaaggacttcactcacacttggaagcttct 1194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcctgcctcagtttgtggatttgatgtatgaaggacttcactcacacttggaagcttct 180
Query: 1195 ggggttgatggggtcaaggttgatgtcatgcatttgctagagctggtggctgagaaatat 1254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggggttgatggggtcaaggttgatgtcatgcatttgctagagctggtggctgagaaatat 240
Query: 1255 ggtggcagagttgatttggcaaaggcatatcacaaggctttcgcagcttcagtgaggaaa 1314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggtggcagagttgatttggcaaaggcatatcacaaggctttcgcagcttcagtgaggaaa 300
Query: 1315 catttcaaa 1323
|||||||||
Sbjct: 301 catttcaaa 309
>gnl|LJGI|TC78101 similar to UniRef100_Q8RX87 Cluster: AT5g20250/F5O24_140; n=3;
Arabidopsis thaliana|Rep: AT5g20250/F5O24_140 -
Arabidopsis thaliana (Mouse-ear cress), partial (58%)
Length = 1690
Score = 61.9 bits (31), Expect = 1e-08
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 655 ttcgggtggtgcacgtgggacgcgttctacc 685
|||||||||||||||||||||||||||||||
Sbjct: 767 ttcgggtggtgcacgtgggacgcgttctacc 797