Miyakogusa Predicted Gene
- Lj2g3v0932700.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0932700.1 Non Chatacterized Hit- tr|B9S651|B9S651_RICCO RNA
binding protein, putative OS=Ricinus communis
GN=R,61.36,0,Invasin/intimin cell-adhesion fragments,Invasin/intimin
cell-adhesion; Big_2,Bacterial Ig-like, grou,CUFF.35787.1
(5874 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC598008 weakly similar to UniRef100_A7PM31 Cluster: Ch... 1084 0.0
gnl|LJGI|AV421041 weakly similar to UniRef100_A7PM31 Cluster: Ch... 553 e-156
gnl|LJGI|TC68840 similar to UniRef100_A7PM31 Cluster: Chromosome... 468 e-130
>gnl|LJGI|DC598008 weakly similar to UniRef100_A7PM31 Cluster: Chromosome chr14
scaffold_21, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_21, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (7%)
Length = 559
Score = 1084 bits (547), Expect = 0.0
Identities = 556/559 (99%)
Strand = Plus / Plus
Query: 3087 gtctgcactggtccaagttgcagatatagactggattaagatcaagtcaggagaagagat 3146
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1 gtctgcactggtccaagttgcagggatagactggattaagatcaagtcaggagaagagat 60
Query: 3147 tagcctgatggaaggaagcttgcaaactatatacttaaccgccggtactaatggtggaaa 3206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tagcctgatggaaggaagcttgcaaactatatacttaaccgccggtactaatggtggaaa 120
Query: 3207 tagttttcattcttctcagtttgtttacatgaatcttcatgtaaatgttgaggatagtat 3266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tagttttcattcttctcagtttgtttacatgaatcttcatgtaaatgttgaggatagtat 180
Query: 3267 aattgagctggtggatactgacaatttctcaagccttgttggcggtcatgttaatgcagc 3326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aattgagctggtggatactgacaatttctcaagccttgttggcggtcatgttaatgcagc 240
Query: 3327 aagttttaaaataaagggaacgcatcttggaattacaaccctttatgtcagtactataca 3386
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 241 aagttttaaaataaagggaacgcatcttggaattgcaaccctttatgtcagtactataca 300
Query: 3387 acattttggacatgtaattcaaagtcaagctattaaggtggaagtatataaagccccaag 3446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acattttggacatgtaattcaaagtcaagctattaaggtggaagtatataaagccccaag 360
Query: 3447 aatacaccctcatgatattttcctgttacccggtgcatcatacgtgtttaccatggaagg 3506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aatacaccctcatgatattttcctgttacccggtgcatcatacgtgtttaccatggaagg 420
Query: 3507 cggcccgactctcagtggtcatgttgagtatgctattgaaaatgacaaaattgcaagtat 3566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cggcccgactctcagtggtcatgttgagtatgctattgaaaatgacaaaattgcaagtat 480
Query: 3567 tgataagtattctggaaggctttcggcagttgctcttggtaacacaaccattcttgctag 3626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgataagtattctggaaggctttcggcagttgctcttggtaacacaaccattcttgctag 540
Query: 3627 tgtctttgtgaaaggcaat 3645
|||||||||||||||||||
Sbjct: 541 tgtctttgtgaaaggcaat 559
>gnl|LJGI|AV421041 weakly similar to UniRef100_A7PM31 Cluster: Chromosome chr14
scaffold_21, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_21, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (5%)
Length = 281
Score = 553 bits (279), Expect = e-156
Identities = 279/279 (100%)
Strand = Plus / Plus
Query: 5151 ggtacactcagcaccgaagttagaaggcatgagaccagatgtatctctctccatatatgc 5210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 ggtacactcagcaccgaagttagaaggcatgagaccagatgtatctctctccatatatgc 62
Query: 5211 ctctcttaaagaacacgaacatgtttctggatctgcatcgacactttttattggaggatt 5270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 ctctcttaaagaacacgaacatgtttctggatctgcatcgacactttttattggaggatt 122
Query: 5271 ttctttaatggagatgggcaagagtccaatgcagctgaatctgacacctggctctaacaa 5330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 ttctttaatggagatgggcaagagtccaatgcagctgaatctgacacctggctctaacaa 182
Query: 5331 aacttacatgacaatcttgggaaatactgatgttgaaattcactggcgttaccgagattt 5390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 aacttacatgacaatcttgggaaatactgatgttgaaattcactggcgttaccgagattt 242
Query: 5391 gattatgatcagtgccattcagaaagaagattttggcct 5429
|||||||||||||||||||||||||||||||||||||||
Sbjct: 243 gattatgatcagtgccattcagaaagaagattttggcct 281
>gnl|LJGI|TC68840 similar to UniRef100_A7PM31 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (3%)
Length = 565
Score = 468 bits (236), Expect = e-130
Identities = 236/236 (100%)
Strand = Plus / Plus
Query: 5639 ttgctatcttcttgcgattcctggacagaccagatagatctcagcaaacaagtgctccgg 5698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgctatcttcttgcgattcctggacagaccagatagatctcagcaaacaagtgctccgg 60
Query: 5699 tcactgccagcattggagctcctacaactcctgaaagaagcagcccaggtgttccaaatg 5758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcactgccagcattggagctcctacaactcctgaaagaagcagcccaggtgttccaaatg 120
Query: 5759 aaatgtctcctcggacaccccaaccatttgtagactatgtacggagaacgatcgatgaaa 5818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaatgtctcctcggacaccccaaccatttgtagactatgtacggagaacgatcgatgaaa 180
Query: 5819 ctccatactacaaacgggaagggaggagaagggtgaatccacagaatacattttag 5874
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctccatactacaaacgggaagggaggagaagggtgaatccacagaatacattttag 236