Miyakogusa Predicted Gene

Lj2g3v0932650.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v0932650.1 tr|G7KEK4|G7KEK4_MEDTR Receptor-like protein
kinase OS=Medicago truncatula GN=MTR_5g096340 PE=4
SV=1,38.64,0.000005,no description,NULL; LRRNT_2,Leucine-rich
repeat-containing N-terminal, type 2; L domain-like,NULL;
,CUFF.35781.1
         (519 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC598178 weakly similar to UniRef100_A7QK47 Cluster: Ch...   200   6e-51

>gnl|LJGI|DC598178 weakly similar to UniRef100_A7QK47 Cluster: Chromosome chr16
           scaffold_110, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr16 scaffold_110, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (13%)
          Length = 588

 Score =  200 bits (101), Expect = 6e-51
 Identities = 270/325 (83%), Gaps = 11/325 (3%)
 Strand = Plus / Plus

                                                                       
Query: 187 aagacaacaacatgggaaaacgggacggattgctgctcatcatggcttggtgtaacgtgc 246
           |||||| ||||||||||||| || || |||||||||||||   |||||||||| ||||| 
Sbjct: 216 aagacagcaacatgggaaaatggaacagattgctgctcat---ggcttggtgtcacgtgt 272

                                                                       
Query: 247 aacccgatctccggtcgcgtgattggtcttgacctcagctgcggagggcttcaaggcgaa 306
            |||   |||| |||| ||||||||| || ||||||||||| | ||||||| ||||  ||
Sbjct: 273 gaccgcgtctctggtcacgtgattggcctcgacctcagctgtgcagggcttgaaggtaaa 332

                                                                       
Query: 307 atccatcctaacagtacccttttccatcttactcacctccagatgctcaaccttgctttc 366
           |||||||| || ||||||||||||||||||||||| || ||||  |||||||||||||||
Sbjct: 333 atccatcccaatagtacccttttccatcttactcatcttcagacactcaaccttgctttc 392

                                                                       
Query: 367 aatgacttctccaactctcacttcccatcgcactttggtggtcttgtgagtctcacacac 426
           ||||| |||||| | |||||||| ||||| || |||||| |||||| |||||||||||||
Sbjct: 393 aatgatttctcctattctcacttgccatctcagtttggtagtcttgcgagtctcacacac 452

                                                                       
Query: 427 ttaaacttgtct----tcctcttccttggaaggtgaaatcccttcccaaatatcacacct 482
            | ||||||  |    |   |||| ||    |||||||| || |||||||||||||||||
Sbjct: 453 ctcaacttgagtaatatggacttcttt----ggtgaaattccctcccaaatatcacacct 508

                                    
Query: 483 ttccaaattagcctcattggatctc 507
           ||||||||||| |||||||||||||
Sbjct: 509 ttccaaattagactcattggatctc 533



 Score = 56.0 bits (28), Expect = 2e-07
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 106 tctgccttgcttcaatttaaggtttccttcac 137
           |||||||||||||||||||||| |||||||||
Sbjct: 123 tctgccttgcttcaatttaaggcttccttcac 154