Miyakogusa Predicted Gene
- Lj2g3v0918390.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0918390.1 tr|I1N5M3|I1N5M3_SOYBN Elongation factor Ts,
mitochondrial OS=Glycine max GN=Gma.57273 PE=3
SV=1,76.15,0,EF_Ts,Translation elongation factor EFTs/EF1B; seg,NULL;
EF_TS,Translation elongation factor EFTs/EF,CUFF.35753.1
(1065 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58032 similar to UniRef100_Q9SWW0 Cluster: Ethylene-r... 1386 0.0
gnl|LJGI|TC64097 similar to UniRef100_Q9SWW0 Cluster: Ethylene-r... 587 e-167
>gnl|LJGI|TC58032 similar to UniRef100_Q9SWW0 Cluster: Ethylene-responsive elongation
factor EF-Ts precursor; n=1; Solanum lycopersicum|Rep:
Ethylene-responsive elongation factor EF-Ts precursor -
Solanum lycopersicum (Tomato) (Lycopersicon esculentum),
partial (49%)
Length = 797
Score = 1386 bits (699), Expect = 0.0
Identities = 699/699 (100%)
Strand = Plus / Plus
Query: 1 atgggttttcacgtcgccgccagacgcttttaccagaacctcgccgccgccgccacctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 atgggttttcacgtcgccgccagacgcttttaccagaacctcgccgccgccgccacctat 158
Query: 61 ggccgtcaatgccaccactactcttcttccgcctcaaacgaaatgaatctggtcaagcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 ggccgtcaatgccaccactactcttcttccgcctcaaacgaaatgaatctggtcaagcaa 218
Query: 121 ctgagagaacgaacaagcgctccgatcaaggacgtgaaagctgctctcgtcgattccaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 ctgagagaacgaacaagcgctccgatcaaggacgtgaaagctgctctcgtcgattccaat 278
Query: 181 tgggacatcgaggaagctcagaaggagctcagaaaacgaggcaaagttctcgcctccaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 tgggacatcgaggaagctcagaaggagctcagaaaacgaggcaaagttctcgcctccaag 338
Query: 241 aaatcctctcgaactgcctccgaaggtttgctcgcgctcgcccatgatcgcaccagagcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 aaatcctctcgaactgcctccgaaggtttgctcgcgctcgcccatgatcgcaccagagcc 398
Query: 301 gccctcgttgaactcaactgcgaaactgatttcgtcgccaggaatgagattttccagcac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 gccctcgttgaactcaactgcgaaactgatttcgtcgccaggaatgagattttccagcac 458
Query: 361 ctggcattgtctttggcgaagcaagctttattgctggaaaactcttctgatgctccattt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 ctggcattgtctttggcgaagcaagctttattgctggaaaactcttctgatgctccattt 518
Query: 421 cactttggacctcaatcactggaggagatgaggttggatcttcagcacccgaagatcagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 cactttggacctcaatcactggaggagatgaggttggatcttcagcacccgaagatcagt 578
Query: 481 ggagaaaccaccgttcacaatgcgatcactgaagtagctgctattatgggggagaatgta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 ggagaaaccaccgttcacaatgcgatcactgaagtagctgctattatgggggagaatgta 638
Query: 541 aaactaaggagaggttttgtgatgcctgcatcgtcgcagggtcttatatctacttatctt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 aaactaaggagaggttttgtgatgcctgcatcgtcgcagggtcttatatctacttatctt 698
Query: 601 cataccagtccccaaccaggtttgggtcgcatagctgggattttgtctcttgaagttgat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 cataccagtccccaaccaggtttgggtcgcatagctgggattttgtctcttgaagttgat 758
Query: 661 aatggcaacacacgagtggatgcacttcaacgagttgga 699
|||||||||||||||||||||||||||||||||||||||
Sbjct: 759 aatggcaacacacgagtggatgcacttcaacgagttgga 797
>gnl|LJGI|TC64097 similar to UniRef100_Q9SWW0 Cluster: Ethylene-responsive elongation
factor EF-Ts precursor; n=1; Solanum lycopersicum|Rep:
Ethylene-responsive elongation factor EF-Ts precursor -
Solanum lycopersicum (Tomato) (Lycopersicon esculentum),
partial (21%)
Length = 730
Score = 587 bits (296), Expect = e-167
Identities = 299/300 (99%)
Strand = Plus / Plus
Query: 766 gaggctttagaaaatgagcgtgaagttcttaaatctcaggcagaagcctctggtaagcct 825
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaggctttagaaaatgagcgtgaagttcttaaatctcaggcagaagcctctggtaagcct 60
Query: 826 caaatggccataaacaaaatggttgaaggaagactgcgcaagtactttgaggaagttgtg 885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caaatggccataaacaaaatggttgaaggaagactgcgcaagtactttgaggaagttgtg 120
Query: 886 ctcatggagcaaaagtttatcttgaatgatgctttaaatgtaaagacagtgctcgataat 945
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 121 ctcatggagcaaaagtttatcttgaatgatgctttgaatgtaaagacagtgctcgataat 180
Query: 946 ctatccaaggaggtgggctcatctgtaaggattgggagctttctcagaatggaagttggg 1005
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctatccaaggaggtgggctcatctgtaaggattgggagctttctcagaatggaagttggg 240
Query: 1006 gaaggaattgcaagtcaagaagcagattcatctgagtctgttgctcaggttgcgtaattt 1065
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaaggaattgcaagtcaagaagcagattcatctgagtctgttgctcaggttgcgtaattt 300