Miyakogusa Predicted Gene
- Lj2g3v0918380.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0918380.1 tr|B9N7N9|B9N7N9_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_584639 PE=4
SV=1,95.45,0,Translation initiation factor 2 beta, aIF2beta,
N-terminal domain,Translation initiation factor IF2/,CUFF.35752.1
(550 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS337618 homologue to UniRef100_P48724 Cluster: Eukaryo... 640 0.0
gnl|LJGI|TC59753 homologue to UniRef100_A7NV57 Cluster: Chromoso... 287 4e-77
>gnl|LJGI|FS337618 homologue to UniRef100_P48724 Cluster: Eukaryotic translation
initiation factor 5; n=1; Phaseolus vulgaris|Rep:
Eukaryotic translation initiation factor 5 - Phaseolus
vulgaris (Kidney bean) (French bean), partial (24%)
Length = 692
Score = 640 bits (323), Expect = 0.0
Identities = 323/323 (100%)
Strand = Plus / Plus
Query: 1 atggcgttacagaacattggcgctggaaacagcgatgatgccttctacaggtataagatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 atggcgttacagaacattggcgctggaaacagcgatgatgccttctacaggtataagatg 429
Query: 61 cctagaatgattaccaaaattgagggtagaggtaatggcatcaagacaaatattgtcaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 cctagaatgattaccaaaattgagggtagaggtaatggcatcaagacaaatattgtcaat 489
Query: 121 atggttgatattgccaaggcgttggcgaggccggccgcgtacacgaccaagtactttggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 atggttgatattgccaaggcgttggcgaggccggccgcgtacacgaccaagtactttggt 549
Query: 181 tgtgagcttggagctcagtccaaatttgatgagaaaaatgggacatctcatgtgaatggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 tgtgagcttggagctcagtccaaatttgatgagaaaaatgggacatctcatgtgaatggg 609
Query: 241 gcacatgaaactgcgaaacttgctgctcttttggagaatttcatcaagaagtatgtccag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 gcacatgaaactgcgaaacttgctgctcttttggagaatttcatcaagaagtatgtccag 669
Query: 301 tgttatggttgtggaaaccctga 323
|||||||||||||||||||||||
Sbjct: 670 tgttatggttgtggaaaccctga 692
>gnl|LJGI|TC59753 homologue to UniRef100_A7NV57 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 740
Score = 287 bits (145), Expect = 4e-77
Identities = 235/265 (88%)
Strand = Plus / Plus
Query: 1 atggcgttacagaacattggcgctggaaacagcgatgatgccttctacaggtataagatg 60
|||||||||||||||||||| ||||| || |||| ||||||||||| ||||||||||||
Sbjct: 468 atggcgttacagaacattggtgctggtaatcgcgacgatgccttctataggtataagatg 527
Query: 61 cctagaatgattaccaaaattgagggtagaggtaatggcatcaagacaaatattgtcaat 120
||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||
Sbjct: 528 cctagaatgattaccaaaattgagggtagaggtaacggcatcaaaacaaatgttgtcaac 587
Query: 121 atggttgatattgccaaggcgttggcgaggccggccgcgtacacgaccaagtactttggt 180
||||||||||| || ||||| ||||||||||| || || ||||| |||||||| || |||
Sbjct: 588 atggttgatatagcaaaggcattggcgaggccagcggcttacactaccaagtatttcggt 647
Query: 181 tgtgagcttggagctcagtccaaatttgatgagaaaaatgggacatctcatgtgaatggg 240
||||| |||||||| ||||| |||||||||||||| | ||| || |||||||| |||||
Sbjct: 648 tgtgaacttggagcccagtcgaaatttgatgagaagactggaacttctcatgtcaatggt 707
Query: 241 gcacatgaaactgcgaaacttgctg 265
|||||||| ||||| ||||||||||
Sbjct: 708 gcacatgatactgcaaaacttgctg 732