Miyakogusa Predicted Gene
- Lj2g3v0917250.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0917250.1 CUFF.35772.1
(1195 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78346 similar to UniRef100_Q2HVF7 Cluster: Homeodomai... 765 0.0
gnl|LJGI|TC71221 similar to UniRef100_Q2HTG7 Cluster: Homeodomai... 624 e-178
gnl|LJGI|TC57438 similar to UniRef100_Q2HTG7 Cluster: Homeodomai... 303 1e-81
gnl|LJGI|TC82041 299 2e-80
>gnl|LJGI|TC78346 similar to UniRef100_Q2HVF7 Cluster: Homeodomain-like; n=1;
Medicago truncatula|Rep: Homeodomain-like - Medicago
truncatula (Barrel medic), partial (41%)
Length = 1247
Score = 765 bits (386), Expect = 0.0
Identities = 466/490 (95%), Gaps = 2/490 (0%)
Strand = Plus / Plus
Query: 464 cacccgcatggaacactgcacaaaatat-ggtgctaattagtgggtggattaactgtgga 522
|||| ||||||| ||||||||||||| | ||||||||||||| ||||||||||| |||||
Sbjct: 367 caccagcatggagcactgcacaaaattttggtgctaattagtcggtggattaaccgtgga 426
Query: 523 acaagcagtgttgtggggaaaaaccagaaaggagaaacatttt-ggagagatattgctga 581
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 427 acaagcagtgttgtggggaaaaaccagaaaggagaaacatttttggagagatattgctga 486
Query: 582 gtattgtaatgagcattgctcattcgatcctccgcgtgatggaattgcatgtcgaaaccg 641
||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 487 gtattgtaatgagcattgctcattcgatcctcctcgtgatggaattgcatgccgaaaccg 546
Query: 642 ttggaattatatgaacaaaatactgggtaaatggattggcgcttatgatgccgctaagcg 701
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 ctggaattatatgaacaaaatactgggtaaatggattggcgcttatgatgccgctaagcg 606
Query: 702 tcaacaaggaagcggttggtcggataatgatgttttggcaaaagcgcaggaattattcgc 761
||| |||| |||||||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 607 tcagcaagcaagcggttggtcggataatgatgttttggcaaaagcgcgggaactattcgc 666
Query: 762 atgtgggaagaatgttcaatttactttgatggaagaatggatcgctctccgtgatctacc 821
||||||||||||||||||||||||||||||||||||||||| || |||||||| ||
Sbjct: 667 ctgtgggaagaatgttcaatttactttgatggaagaatggatacaacttcgtgatctgcc 726
Query: 822 acgtttttgtagtcaagtaggaggaaatggtggctcagcaagtagtggatctaagagatc 881
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 727 acgtttttgtagtcaagtaggaggaaatagtggctcagcaagtagtggatctaagagatc 786
Query: 882 tcacgacagtgatgcatgtggctcaaccactataggatcaattcctcgtccaatgggtag 941
|||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 787 tcacgacagtgatgcatgtggctcaacctctataggatcaattcctcgtccaatcggtag 846
Query: 942 ggaggcagct 951
||||||||||
Sbjct: 847 ggaggcagct 856
Score = 123 bits (62), Expect = 3e-27
Identities = 110/126 (87%)
Strand = Plus / Plus
Query: 1070 tgcaagaacaaactaaccaattgatgaaaaccaatttgtatctcaagctaagttctgaag 1129
|||||||| | |||||||||||||||||||||||||||||||| | ||||| ||| ||||
Sbjct: 978 tgcaagaagagactaaccaattgatgaaaaccaatttgtatctaaggctaacttccgaag 1037
Query: 1130 aggatctcgatgaccgtaagaaagagctgttgagtaagttggcccaagacctatttggta 1189
|| | ||||||| || ||||||||||||||||| |||||| ||||||| ||||||| |
Sbjct: 1038 agaacctcgatggccataagaaagagctgttgaagaagttgtcccaagagctatttgaga 1097
Query: 1190 attaat 1195
||||||
Sbjct: 1098 attaat 1103
Score = 77.8 bits (39), Expect = 1e-13
Identities = 78/91 (85%)
Strand = Plus / Plus
Query: 325 tctagtggttatatgccaatggttcgtgcaaattttcctagtgttgatggaccggaattt 384
||||||||||||||| ||||||| || ||||||| | |||||||||| ||| ||||||
Sbjct: 207 tctagtggttatatggcaatggtgaatgaaaatttttcaagtgttgatgcacctgaattt 266
Query: 385 ccggaattttcaacacaagtcaatcttggtg 415
|| ||||||||||||||| | | ||||||||
Sbjct: 267 cccgaattttcaacacaaatgactcttggtg 297
>gnl|LJGI|TC71221 similar to UniRef100_Q2HTG7 Cluster: Homeodomain-like; n=1;
Medicago truncatula|Rep: Homeodomain-like - Medicago
truncatula (Barrel medic), partial (37%)
Length = 718
Score = 624 bits (315), Expect = e-178
Identities = 384/406 (94%), Gaps = 2/406 (0%)
Strand = Plus / Plus
Query: 464 cacccgcatggaacactgcacaaaatatggtgctaattagtgggtggattaactgtggaa 523
|||| ||||||| ||||||||||||| |||||||||||||| ||||||||||| ||||||
Sbjct: 315 caccagcatggagcactgcacaaaatttggtgctaattagtcggtggattaaccgtggaa 374
Query: 524 caagcagtgttgtggggaaaaaccagaaaggagaaacattttggagagatattgctgagt 583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 caagcagtgttgtggggaaaaaccagaaaggagaaacattttggagagatattgctgagt 434
Query: 584 attgtaatgagcattgctcattcgatcctccgcgtgatggaattgcatgtcgaaaccgtt 643
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 435 attgtaatgagcattgctcattcgatcctccgcgtgatggaattgcatgccgaaaccgct 494
Query: 644 ggaattatatgaacaaaatactgggtaaatggattggcgcttatgatgccgctaagcgtc 703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 ggaattatatgaacaaaatactgggtaaatggattggcgcttatgatgccgctaagcgtc 554
Query: 704 aacaaggaagcggttggtcggataatgatgttttggcaaaagcgcaggaattattcgcat 763
| |||| |||||||||||||||||||||||||||||||||||||| |||| ||||||| |
Sbjct: 555 agcaagcaagcggttggtcggataatgatgttttggcaaaagcgcgggaactattcgcct 614
Query: 764 gtgggaagaatgttcaatttactttgatggaagaatggatcgctctccgtgatctaccac 823
|||||||||||||||||||||||||||||||||||||||| || |||||||| ||||
Sbjct: 615 gtgggaagaatgttcaatttactttgatggaagaatggatacaacttcgtgatctgccac 674
Query: 824 gtttttgtagtcaagtaggaggaaatggtggctcagcaagtagtgg 869
|||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 675 gtttttgtagtcaagtag--agaaatagtggctcagcaagtagtgg 718
Score = 77.8 bits (39), Expect = 1e-13
Identities = 78/91 (85%)
Strand = Plus / Plus
Query: 325 tctagtggttatatgccaatggttcgtgcaaattttcctagtgttgatggaccggaattt 384
||||||||||||||| ||||||| || ||||||| | |||||||||| ||| ||||||
Sbjct: 155 tctagtggttatatggcaatggtgaatgaaaatttttcaagtgttgatgcacctgaattt 214
Query: 385 ccggaattttcaacacaagtcaatcttggtg 415
|| ||||||||||||||| | | ||||||||
Sbjct: 215 cccgaattttcaacacaaatgactcttggtg 245
>gnl|LJGI|TC57438 similar to UniRef100_Q2HTG7 Cluster: Homeodomain-like; n=1;
Medicago truncatula|Rep: Homeodomain-like - Medicago
truncatula (Barrel medic), partial (26%)
Length = 838
Score = 303 bits (153), Expect = 1e-81
Identities = 186/197 (94%)
Strand = Plus / Plus
Query: 755 tattcgcatgtgggaagaatgttcaatttactttgatggaagaatggatcgctctccgtg 814
||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 88 tattcgcctgtgggaagaatgttcaatttactttgatggaagaatggatacaacttcgtg 147
Query: 815 atctaccacgtttttgtagtcaagtaggaggaaatggtggctcagcaagtagtggatcta 874
|||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 148 atctgccacgtttttgtagtcaagtaggaggaaatagtggctcagcaagtagtggatcta 207
Query: 875 agagatctcacgacagtgatgcatgtggctcaaccactataggatcaattcctcgtccaa 934
|||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||
Sbjct: 208 agagatctcacgacagtgatgcgtgtggctcaacctctataggatcaattcctcgtccaa 267
Query: 935 tgggtagggaggcagct 951
| |||||||||||||||
Sbjct: 268 tcggtagggaggcagct 284
Score = 123 bits (62), Expect = 3e-27
Identities = 110/126 (87%)
Strand = Plus / Plus
Query: 1070 tgcaagaacaaactaaccaattgatgaaaaccaatttgtatctcaagctaagttctgaag 1129
|||||||| | |||||||||||||||||||||||||||||||| | ||||| ||| ||||
Sbjct: 406 tgcaagaagagactaaccaattgatgaaaaccaatttgtatctaaggctaacttccgaag 465
Query: 1130 aggatctcgatgaccgtaagaaagagctgttgagtaagttggcccaagacctatttggta 1189
|| | ||||||| || ||||||||||||||||| |||||| ||||||| ||||||| |
Sbjct: 466 agaacctcgatggccataagaaagagctgttgaagaagttgtcccaagagctatttgaga 525
Query: 1190 attaat 1195
||||||
Sbjct: 526 attaat 531
>gnl|LJGI|TC82041
Length = 494
Score = 299 bits (151), Expect = 2e-80
Identities = 227/251 (90%), Gaps = 1/251 (0%)
Strand = Plus / Plus
Query: 8 ccaacaatcaccattacaacacccagaattcttcaagctacccaatttccaaccaaaatc 67
|||||||||||||| ||||||||||||||||| || | ||| | ||| |||||||||||
Sbjct: 1 ccaacaatcaccatctcaacacccagaattctttaaacaacctattttacaaccaaaatc 60
Query: 68 ccaacaactatgaagatccaaatcaa-ttttcttacccacgtcctcaaaatcccaccaat 126
|||||||||||||||| |||||||| |||||||||| ||||||||||||||| | | ||
Sbjct: 61 acaacaactatgaagattcaaatcaaattttcttaccaacgtcctcaaaatccaaactat 120
Query: 127 tatcaagtcccacatcaattctccaaccaacgtcctcaaaatccaaactattttcaagtc 186
||||||||| |||||||| | ||||||||||||||||||||||||||||||| |||||||
Sbjct: 121 tatcaagtctcacatcaaatgtccaaccaacgtcctcaaaatccaaactattatcaagtc 180
Query: 187 ccacatcaattctccaaccaacatcctcaaaatccaaactattatccagatccaaatcag 246
||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 181 ccacatcaaatctccaaccaacgtcctcgaaatccaaactattatccagatccaaatcaa 240
Query: 247 tattcgaacca 257
|||||| ||||
Sbjct: 241 tattcgtacca 251
Score = 54.0 bits (27), Expect = 2e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 253 aaccagtcatcatttgttccaaactttcatccatcttat 291
|||||||||||| |||||| ||||| |||||||||||||
Sbjct: 277 aaccagtcatcaattgttctaaactctcatccatcttat 315