Miyakogusa Predicted Gene

Lj2g3v0916180.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v0916180.1 tr|B9I8E0|B9I8E0_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_807105 PE=4 SV=1,65.96,1e-17,
,CUFF.35730.1
         (381 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC65566 weakly similar to UniRef100_Q2Z1Y5 Cluster: Pm5...   628   e-180
gnl|LJGI|BP052504 similar to UniRef100_A3LIC1 Cluster: Glycolate...   129   1e-29

>gnl|LJGI|TC65566 weakly similar to UniRef100_Q2Z1Y5 Cluster: Pm52 protein; n=1;
           Prunus mume|Rep: Pm52 protein - Prunus mume (Japanese
           flowering apricot), partial (59%)
          Length = 670

 Score =  628 bits (317), Expect = e-180
 Identities = 317/317 (100%)
 Strand = Plus / Plus

                                                                       
Query: 65  ttcacggagatcctaccaccgggaaactcaaggttcggacccaaccccagtctctctccg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92  ttcacggagatcctaccaccgggaaactcaaggttcggacccaaccccagtctctctccg 151

                                                                       
Query: 125 gcaaacgcaagcgcaagctcttcaactactggcgccgagagcaaaaggaagcgttgcaga 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 gcaaacgcaagcgcaagctcttcaactactggcgccgagagcaaaaggaagcgttgcaga 211

                                                                       
Query: 185 atggcgtggtgaccatggaagatgtgcaaatggcagttgctgaaggcgcaaccaaagatg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 atggcgtggtgaccatggaagatgtgcaaatggcagttgctgaaggcgcaaccaaagatg 271

                                                                       
Query: 245 ctcctaaatcttctgggaaaaaatttcacttgaagaagaagagcagcttcaaactcaagc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 ctcctaaatcttctgggaaaaaatttcacttgaagaagaagagcagcttcaaactcaagc 331

                                                                       
Query: 305 gcaaagggaaaaaagacaaaagaaaatctgatgcgcctgctgctgatatttccgctaatg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 gcaaagggaaaaaagacaaaagaaaatctgatgcgcctgctgctgatatttccgctaatg 391

                            
Query: 365 caatggtagagtaatta 381
           |||||||||||||||||
Sbjct: 392 caatggtagagtaatta 408


>gnl|LJGI|BP052504 similar to UniRef100_A3LIC1 Cluster: Glycolate oxidase subunit
           GlcE; n=1; Pseudomonas aeruginosa 2192|Rep: Glycolate
           oxidase, partial (3%)
          Length = 489

 Score =  129 bits (65), Expect = 1e-29
 Identities = 71/73 (97%)
 Strand = Plus / Minus

                                                                       
Query: 309 agggaaaaaagacaaaagaaaatctgatgcgcctgctgctgatatttccgctaatgcaat 368
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 307 agggaaaaaagaccaaagaaaatctgatgcgcctgctgctgatatttccgctaatgccat 248

                        
Query: 369 ggtagagtaatta 381
           |||||||||||||
Sbjct: 247 ggtagagtaatta 235