Miyakogusa Predicted Gene
- Lj2g3v0914370.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0914370.1 Non Chatacterized Hit- tr|I1KJW6|I1KJW6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.26828
PE,80.11,0,Auxin_resp,Auxin response factor; AUX_IAA,AUX/IAA protein;
B3,B3 DNA binding domain; DNA-binding
pse,NODE_27013_length_4605_cov_219.492935.path1.1
(3132 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76192 similar to UniRef100_A7PFD6 Cluster: Chromosome... 993 0.0
gnl|LJGI|BW633246 similar to UniRef100_A7PFD6 Cluster: Chromosom... 912 0.0
gnl|LJGI|BP052829 155 2e-36
gnl|LJGI|BP042557 homologue to UniRef100_A7PJQ8 Cluster: Chromos... 98 4e-19
gnl|LJGI|TC64953 homologue to UniRef100_Q6L8U1 Cluster: Auxin re... 88 4e-16
gnl|LJGI|TC81270 similar to UniRef100_A7NSY4 Cluster: Chromosome... 54 5e-06
>gnl|LJGI|TC76192 similar to UniRef100_A7PFD6 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 1280
Score = 993 bits (501), Expect = 0.0
Identities = 501/501 (100%)
Strand = Plus / Plus
Query: 2632 gaactttcatcttcaatggtttcacaaacatttggagtccctgatatgacctttaattca 2691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaactttcatcttcaatggtttcacaaacatttggagtccctgatatgacctttaattca 60
Query: 2692 attgattccacaatcgatgacagtagcttcttgaatggtgatccatggggtccacaacca 2751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attgattccacaatcgatgacagtagcttcttgaatggtgatccatggggtccacaacca 120
Query: 2752 gcaccgccaccaccaccagcacagtttcagcggatgaggacatataccaaggtatataaa 2811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcaccgccaccaccaccagcacagtttcagcggatgaggacatataccaaggtatataaa 180
Query: 2812 cggggagctgtgggaaggtccatcgatatagcacggtattcaggatatgaggagcttaaa 2871
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cggggagctgtgggaaggtccatcgatatagcacggtattcaggatatgaggagcttaaa 240
Query: 2872 caggatctagctcgtaggtttggcattgagggacaattggaggatcgacaaaggataggt 2931
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 caggatctagctcgtaggtttggcattgagggacaattggaggatcgacaaaggataggt 300
Query: 2932 tggaaacttgtctatgtagatcatgagggtgatgttctactagtgggagatgacccttgg 2991
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tggaaacttgtctatgtagatcatgagggtgatgttctactagtgggagatgacccttgg 360
Query: 2992 gaggagtttgttaactgtgtccgctgtattaaaatactttctccccaagaagtgcaacaa 3051
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaggagtttgttaactgtgtccgctgtattaaaatactttctccccaagaagtgcaacaa 420
Query: 3052 atgagtttggatggagattttggcagtggtggccttccaaatcaagcctgtagcagctct 3111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atgagtttggatggagattttggcagtggtggccttccaaatcaagcctgtagcagctct 480
Query: 3112 gatggtgggaatacttaaatg 3132
|||||||||||||||||||||
Sbjct: 481 gatggtgggaatacttaaatg 501
>gnl|LJGI|BW633246 similar to UniRef100_A7PFD6 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 460
Score = 912 bits (460), Expect = 0.0
Identities = 460/460 (100%)
Strand = Plus / Plus
Query: 2012 aatctgtaattactgatgatgttccatcttgttccacctcaccttctacaaataactgta 2071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aatctgtaattactgatgatgttccatcttgttccacctcaccttctacaaataactgta 60
Query: 2072 ccaatgctcttccgcaattgataaattctcacttacatagaagcacaatgttaggagatg 2131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccaatgctcttccgcaattgataaattctcacttacatagaagcacaatgttaggagatg 120
Query: 2132 acatggctcagtctgctgccacaatcttgagttcaagtgccttagaaactgtgtcatcaa 2191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acatggctcagtctgctgccacaatcttgagttcaagtgccttagaaactgtgtcatcaa 180
Query: 2192 acgcaaatttgttgaaagatttgcacccccactctgaagttaaggcttctctcaacattt 2251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acgcaaatttgttgaaagatttgcacccccactctgaagttaaggcttctctcaacattt 240
Query: 2252 caaaaaatcagaatcaaggaaattttgtttctcagacatacttgaatagtggagctgccc 2311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 caaaaaatcagaatcaaggaaattttgtttctcagacatacttgaatagtggagctgccc 300
Query: 2312 cgacagattgtttggatacatcatcttctacatcagtttgtctgtctcagaatgatgttc 2371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cgacagattgtttggatacatcatcttctacatcagtttgtctgtctcagaatgatgttc 360
Query: 2372 acatgcatcagattaacaacccattatcttacaatccacagtctatgttctttagagaca 2431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acatgcatcagattaacaacccattatcttacaatccacagtctatgttctttagagaca 420
Query: 2432 atagtcgagatggggaagttcaggcagatggtaggagcaa 2471
||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atagtcgagatggggaagttcaggcagatggtaggagcaa 460
>gnl|LJGI|BP052829
Length = 562
Score = 155 bits (78), Expect = 2e-36
Identities = 92/94 (97%), Gaps = 2/94 (2%)
Strand = Plus / Minus
Query: 2908 ttggaggatcgacaaaggataggttggaaacttgtctatgtagatcatgagggtgatgtt 2967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ttggaggatcgacaaaggataggttggaaacttgtctatgtagatcatgagggtgatgtt 503
Query: 2968 ctacta-gtgggagatgac-ccttgggaggagtt 2999
|||||| |||||||||||| ||||||||||||||
Sbjct: 502 ctactatgtgggagatgacaccttgggaggagtt 469
>gnl|LJGI|BP042557 homologue to UniRef100_A7PJQ8 Cluster: Chromosome chr12
scaffold_18, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_18, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (22%)
Length = 545
Score = 97.6 bits (49), Expect = 4e-19
Identities = 109/129 (84%)
Strand = Plus / Plus
Query: 433 tcaagtgatagcatgcacattggaattcttgctgctgcagctcatgctgctgcaaacaat 492
||||||||||||||||||||||| |||||||||||||||||||||| ||| | | |||
Sbjct: 407 tcaagtgatagcatgcacattggccttcttgctgctgcagctcatgcagcttccacaaat 466
Query: 493 agtcccttcactatcttttataaccctagggctagtccctcagaatttgttattccttta 552
|||| ||| || || || ||||| |||||||| || || || |||||||| ||||||||
Sbjct: 467 agtcgctttaccatattctataatcctagggcaagcccatctgaatttgtaattcctttg 526
Query: 553 gccaagtac 561
||| |||||
Sbjct: 527 gcccagtac 535
>gnl|LJGI|TC64953 homologue to UniRef100_Q6L8U1 Cluster: Auxin response factor 3;
n=1; Cucumis sativus|Rep: Auxin response factor 3 -
Cucumis sativus (Cucumber), partial (26%)
Length = 713
Score = 87.7 bits (44), Expect = 4e-16
Identities = 107/128 (83%)
Strand = Plus / Plus
Query: 433 tcaagtgatagcatgcacattggaattcttgctgctgcagctcatgctgctgcaaacaat 492
|||||||||||||||||| | || |||||||||||||||||||||| ||||||| |||
Sbjct: 231 tcaagtgatagcatgcacttggggcttcttgctgctgcagctcatgcagctgcaacaaat 290
Query: 493 agtcccttcactatcttttataaccctagggctagtccctcagaatttgttattccttta 552
|||| ||||| || || |||||||| | |||| || ||||||||||| || ||||||
Sbjct: 291 agtcgtttcaccattttctataacccgcgtactagcccatcagaatttgtcataccttta 350
Query: 553 gccaagta 560
|| |||||
Sbjct: 351 gcgaagta 358
>gnl|LJGI|TC81270 similar to UniRef100_A7NSY4 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 786
Score = 54.0 bits (27), Expect = 5e-06
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 2944 tatgtagatcatgagggtgatgttctactagtgggagatgacccttgggaggagtttgt 3002
||||||||| ||||| ||||||||||||| || || ||||| |||||||| || |||||
Sbjct: 166 tatgtagattatgagagtgatgttctacttgtaggtgatgatccttgggaagaatttgt 224