Miyakogusa Predicted Gene
- Lj2g3v0914330.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0914330.1 Non Chatacterized Hit- tr|K4CYX1|K4CYX1_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,40,0.000000000000007,MBD,Methyl-CpG DNA binding; ZF_CW,Zinc
finger, CW-type; zf-CW,Zinc finger, CW-type; Methyl-CpG
bindi,NODE_55981_length_1550_cov_57.864517.path1.1
(1038 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72771 homologue to UniRef100_A7R4F2 Cluster: Chromoso... 846 0.0
gnl|LJGI|TC79742 similar to UniRef100_Q12K73 Cluster: Metal-bind... 289 2e-77
>gnl|LJGI|TC72771 homologue to UniRef100_A7R4F2 Cluster: Chromosome undetermined
scaffold_675, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_675,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (7%)
Length = 685
Score = 846 bits (427), Expect = 0.0
Identities = 433/435 (99%)
Strand = Plus / Plus
Query: 1 atgcatcctcgtaagttttttcttacacccaagaatcaagtcaaggagaatgaaatgcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 atgcatcctcgtaagttttttcttacacccaagaatcaagtcaaggagaatgaaatgcat 310
Query: 61 cctcgtaaatttttcctttcacccaagaatcaagttgaggacctaacaggttccagttgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 cctcgtaaatttttcctttcacccaagaatcaagttgaggacctaacaggttccagttgt 370
Query: 121 accagtcaccaacaaagctgtctaccagatccaatatatgtttcttcttcatcgtcagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 accagtcaccaacaaagctgtctaccagatccaatatatgtttcttcttcatcgtcagat 430
Query: 181 gatgaaaatgacctgcctaatgatgatgatgcatctaaacaactggtcctttatgaccct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gatgaaaatgacctgcctaatgatgatgatgcatctaaacaactggtcctttatgaccct 490
Query: 241 gccagcaatgaaaacaacaaaattgaacttgctcctggtcctcttcctctacagtgtgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 gccagcaatgaaaacaacaaaattgaacttgctcctggtcctcttcctctacagtgtgaa 550
Query: 301 ccacctccattgcttgatttacttccaagaagtaaaccttcgaggtcagttcctagagtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 551 ccacctccattgcttgatttacttccaagaagtaaaccttcgaggtcagttcctaaagtt 610
Query: 361 ttgccatcagtcggtgctttcactgttcagtgtgcatcctgctttaaatggaggttgatt 420
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 611 ttgccatcagtcggtgctttcactgctcagtgtgcatcctgctttaaatggaggttgatt 670
Query: 421 ccaacaaaggaaaaa 435
|||||||||||||||
Sbjct: 671 ccaacaaaggaaaaa 685
Score = 61.9 bits (31), Expect = 7e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 53 aaatgcatcctcgtaaatttttcctttcacccaagaatcaagt 95
|||||||||||||||| ||||| ||| ||||||||||||||||
Sbjct: 249 aaatgcatcctcgtaagttttttcttacacccaagaatcaagt 291
>gnl|LJGI|TC79742 similar to UniRef100_Q12K73 Cluster: Metal-binding protein; n=1;
Shewanella denitrificans OS217|Rep: Metal-binding protein
- Shewanella denitrificans (strain OS217 / ATCC BAA-1090
/ DSM 15013), partial (12%)
Length = 414
Score = 289 bits (146), Expect = 2e-77
Identities = 149/150 (99%)
Strand = Plus / Plus
Query: 889 ggtccagaagactctgctaattctgatgaggacagatcagggattcccgctccattcttc 948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtccagaagactctgctaattctgatgaggacagatcagggattcccgctccattcttc 60
Query: 949 gggtcggatgtttttgaccctatcagccgtcctacaaagaagagaacagtacagaagcaa 1008
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 61 gggtcggatgtttttgaccctatcagccgtcctacaaagaagagaacagtacagaagcca 120
Query: 1009 agttccttccaaaatgatgccctatagtaa 1038
||||||||||||||||||||||||||||||
Sbjct: 121 agttccttccaaaatgatgccctatagtaa 150