Miyakogusa Predicted Gene
- Lj2g3v0911680.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0911680.2 tr|F2CY42|F2CY42_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,55.84,2e-17,SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; Serine/Threonine protein kinases,
catalytic,Serine/,CUFF.35640.2
(1605 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC593010 weakly similar to UniRef100_A7PEA2 Cluster: Ch... 646 0.0
gnl|LJGI|TC60767 similar to UniRef100_A7PEA2 Cluster: Chromosome... 607 e-173
gnl|LJGI|DC599925 weakly similar to UniRef100_Q9FJT4 Cluster: Si... 333 2e-90
gnl|LJGI|FS361143 similar to UniRef100_A7P6T4 Cluster: Chromosom... 234 1e-60
>gnl|LJGI|DC593010 weakly similar to UniRef100_A7PEA2 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (17%)
Length = 583
Score = 646 bits (326), Expect = 0.0
Identities = 326/326 (100%)
Strand = Plus / Plus
Query: 1 atggtgctccaacttcatgacttgtatgatccagagaagataaagatcagaataaaggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 atggtgctccaacttcatgacttgtatgatccagagaagataaagatcagaataaaggtt 317
Query: 61 ctttctggttcttcatgtggagtagtggctgctgaagccaagaaagtccaatcaagctgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ctttctggttcttcatgtggagtagtggctgctgaagccaagaaagtccaatcaagctgg 377
Query: 121 gttatattggacagaaagttgaaaaatgaaaagaaacactgcatggaggagctgagttgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gttatattggacagaaagttgaaaaatgaaaagaaacactgcatggaggagctgagttgc 437
Query: 181 aacactgtaatcatggggctatttgggccaaaggttttaagattgaatttgaattttaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 aacactgtaatcatggggctatttgggccaaaggttttaagattgaatttgaattttaac 497
Query: 241 agttcaccaaatgtggaaattatagggaagctgaaagcatttccaagaaacttcaaagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 agttcaccaaatgtggaaattatagggaagctgaaagcatttccaagaaacttcaaagaa 557
Query: 301 aagtctgacttgactgcaactaacat 326
||||||||||||||||||||||||||
Sbjct: 558 aagtctgacttgactgcaactaacat 583
>gnl|LJGI|TC60767 similar to UniRef100_A7PEA2 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 833
Score = 607 bits (306), Expect = e-173
Identities = 309/310 (99%)
Strand = Plus / Plus
Query: 1296 tggtcaaatcactgaaaaagcagatgtgtactcctttggagtagtactactggagcttgt 1355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 tggtcaaatcactgaaaaagcagatgtgtactcctttggagtagtactactggagcttgt 70
Query: 1356 tacaggacagaaagctgtggatatgaacaagcccaaagggcagcaatgtcttcatgaatg 1415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 tacaggacagaaagctgtggatatgaacaagcccaaagggcagcaatgtcttcatgaatg 130
Query: 1416 ggcacgcccattgcttgagggaaatgccattgataaagtggttgatccaagaataacaaa 1475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 ggcacgcccattgcttgagggaaatgccattgataaagtggttgatccaagaataacaaa 190
Query: 1476 ctgcagtgttgatcaagaggttcatcgcatgctgaaatgtgcctcattgtgcatccagca 1535
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 191 ctgcagtgttgatcaagaggttcatcgcatactgaaatgtgcctcattgtgcatccagca 250
Query: 1536 agatcctcatttaagaccacgaatgtcacaggtgctccggatgcttgaaggtgatatttt 1595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 agatcctcatttaagaccacgaatgtcacaggtgctccggatgcttgaaggtgatatttt 310
Query: 1596 gacgtgattg 1605
||||||||||
Sbjct: 311 gacgtgattg 320
>gnl|LJGI|DC599925 weakly similar to UniRef100_Q9FJT4 Cluster: Similarity to protein
kinase; n=1; Arabidopsis thaliana|Rep: Similarity to
protein kinase - Arabidopsis thaliana (Mouse-ear cress),
partial (8%)
Length = 560
Score = 333 bits (168), Expect = 2e-90
Identities = 168/168 (100%)
Strand = Plus / Plus
Query: 1 atggtgctccaacttcatgacttgtatgatccagagaagataaagatcagaataaaggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 atggtgctccaacttcatgacttgtatgatccagagaagataaagatcagaataaaggtt 452
Query: 61 ctttctggttcttcatgtggagtagtggctgctgaagccaagaaagtccaatcaagctgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ctttctggttcttcatgtggagtagtggctgctgaagccaagaaagtccaatcaagctgg 512
Query: 121 gttatattggacagaaagttgaaaaatgaaaagaaacactgcatggag 168
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 gttatattggacagaaagttgaaaaatgaaaagaaacactgcatggag 560
>gnl|LJGI|FS361143 similar to UniRef100_A7P6T4 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (17%)
Length = 722
Score = 234 bits (118), Expect = 1e-60
Identities = 310/374 (82%)
Strand = Plus / Minus
Query: 1216 tggcagccagatggtgaaatgggtgtggaaaccagggtgatagggacatttgggtatttg 1275
|||||||||||||| || || ||||| ||||| ||||||||||| |||||||||||||||
Sbjct: 722 tggcagccagatggagatataggtgtagaaacaagggtgataggaacatttgggtatttg 663
Query: 1276 gctccagaatatacccaaagtggtcaaatcactgaaaaagcagatgtgtactcctttgga 1335
|| ||||||||| | |||||||||||||| ||||||||||| ||||||||||| |||||
Sbjct: 662 gcaccagaatatgctcaaagtggtcaaattactgaaaaagctgatgtgtactcatttggg 603
Query: 1336 gtagtactactggagcttgttacaggacagaaagctgtggatatgaacaagcccaaaggg 1395
|||| || ||||||||||| || |||| ||||| |||||||| ||| ||||| ||
Sbjct: 602 atagtgctgctggagcttgtgaccggacgaaaagccgtggatattaaccggcccaggggc 543
Query: 1396 cagcaatgtcttcatgaatgggcacgcccattgcttgagggaaatgccattgataaagtg 1455
|||||||| || ||||||||| ||||| |||||||| | | |||||||| ||||| |
Sbjct: 542 cagcaatgcctcagtgaatgggcgcgcccgttgcttgaagaacatgccattcataaacta 483
Query: 1456 gttgatccaagaataacaaactgcagtgttgatcaagaggttcatcgcatgctgaaatgt 1515
| ||||| || |||| |||||| |||||||||||||| | ||||||||||| ||||
Sbjct: 482 ttagatccgagcataaagaactgctatgttgatcaagaggcttatcgcatgctgcaatgc 423
Query: 1516 gcctcattgtgcatccagcaagatcctcatttaagaccacgaatgtcacaggtgctccgg 1575
|||| |||||||||| | |||||| ||| |||| || |||||||| ||||||||| |
Sbjct: 422 tcctctttgtgcatccgacgagatccacatataaggccccgaatgtctcaggtgctcaag 363
Query: 1576 atgcttgaaggtga 1589
||||| ||||||||
Sbjct: 362 atgctggaaggtga 349