Miyakogusa Predicted Gene
- Lj2g3v0911670.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0911670.1 tr|A9T9S5|A9T9S5_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_168816,44.35,5e-18,GIY-YIG type nucleases (URI
domain),UvrABC system subunit C, N-terminal,CUFF.35645.1
(1425 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62624 similar to UniRef100_O04239 Cluster: Transcript... 1459 0.0
gnl|LJGI|TC62214 weakly similar to UniRef100_A7PEA3 Cluster: Chr... 1300 0.0
>gnl|LJGI|TC62624 similar to UniRef100_O04239 Cluster: Transcripteion factor; n=1;
Vicia faba var. minor|Rep: Transcripteion factor - Vicia
faba var. minor, partial (56%)
Length = 847
Score = 1459 bits (736), Expect = 0.0
Identities = 736/736 (100%)
Strand = Plus / Plus
Query: 1 atggtggctgcggccgtcaacaacaggttgaagagggagcaatgcgaccgcaccaaacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 atggtggctgcggccgtcaacaacaggttgaagagggagcaatgcgaccgcaccaaacac 171
Query: 61 gattccaacttttcccattggaagattcttattggcccttctgattgggaggacttttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 gattccaacttttcccattggaagattcttattggcccttctgattgggaggacttttcc 231
Query: 121 aagggaaaggaaggatctgcaaggtacaggattcataaccttcataaaaattcaggatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 aagggaaaggaaggatctgcaaggtacaggattcataaccttcataaaaattcaggatca 291
Query: 181 ggagtttatgagcttgggatagctgtgtcgaggagcggtttggggcgtgaaatttataag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 ggagtttatgagcttgggatagctgtgtcgaggagcggtttggggcgtgaaatttataag 351
Query: 241 cttgtggccgctgaccctcaacgcgttgttgtggtttaccttggagaagcggacaatgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 cttgtggccgctgaccctcaacgcgttgttgtggtttaccttggagaagcggacaatgtg 411
Query: 301 agagcgcggctccagtgttatggcagaagtggggctcatctgggcaatagcggctcggat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 agagcgcggctccagtgttatggcagaagtggggctcatctgggcaatagcggctcggat 471
Query: 361 gatgcgtctccgcagaaggggcggccattgtttcaggagatattttctcaaggcttccca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 gatgcgtctccgcagaaggggcggccattgtttcaggagatattttctcaaggcttccca 531
Query: 421 attgtttatagatgggctcctatgcaaaacaaggaagatgctctgcgaacagaagctcag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 attgtttatagatgggctcctatgcaaaacaaggaagatgctctgcgaacagaagctcag 591
Query: 481 ctgctcgatacatttgattatgcatggaatactagcaataatggtactcggcggcctgat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 ctgctcgatacatttgattatgcatggaatactagcaataatggtactcggcggcctgat 651
Query: 541 gatattcttcgaatgctaaacaaaattgcttcgagcaccagaacattttcagatgtagcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 gatattcttcgaatgctaaacaaaattgcttcgagcaccagaacattttcagatgtagcc 711
Query: 601 aaagtgcttctacctttcactcagaggcaagtgggtatccaaattgaatcaagcaagcta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 aaagtgcttctacctttcactcagaggcaagtgggtatccaaattgaatcaagcaagcta 771
Query: 661 cctcttgcaaatgacaaatcagatgatgaagcagacagtggcagcaataatttcctatct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 cctcttgcaaatgacaaatcagatgatgaagcagacagtggcagcaataatttcctatct 831
Query: 721 cgtgtattcaaattta 736
||||||||||||||||
Sbjct: 832 cgtgtattcaaattta 847
>gnl|LJGI|TC62214 weakly similar to UniRef100_A7PEA3 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (12%)
Length = 1423
Score = 1300 bits (656), Expect = 0.0
Identities = 656/656 (100%)
Strand = Plus / Plus
Query: 770 ctagtggcgtcattcaggagaatgctaaaatttgtggagtgacgttgggtgatggttcta 829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctagtggcgtcattcaggagaatgctaaaatttgtggagtgacgttgggtgatggttcta 60
Query: 830 tttgtagaaagccgccagctgagaaaagactgaggtgtcctgaacacaaaggaatgagaa 889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttgtagaaagccgccagctgagaaaagactgaggtgtcctgaacacaaaggaatgagaa 120
Query: 890 caaatgtgtccactgccaaagccatcaaagcacctgaatcaaagagcgttagctacagat 949
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caaatgtgtccactgccaaagccatcaaagcacctgaatcaaagagcgttagctacagat 180
Query: 950 accaaaatgccagccatgatataaaagaccctccacaaaccttggtcgagcgtcctgttg 1009
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 accaaaatgccagccatgatataaaagaccctccacaaaccttggtcgagcgtcctgttg 240
Query: 1010 atgagattatcacccagactaatatatgtggaatcgtcttggataatggcttcccttgta 1069
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atgagattatcacccagactaatatatgtggaatcgtcttggataatggcttcccttgta 300
Query: 1070 gaagagaaccagttaaaggaagaaaaaggtgccaagaacacaaaggaatgagaagaaatg 1129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaagagaaccagttaaaggaagaaaaaggtgccaagaacacaaaggaatgagaagaaatg 360
Query: 1130 tgtccactgccaaagtgatcaaagcacccaagtcagaggacattgtgctaccctatgaat 1189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgtccactgccaaagtgatcaaagcacccaagtcagaggacattgtgctaccctatgaat 420
Query: 1190 ttcctcaaacagagggcaatggctacagataccaaaatgtcagtcatgatgtaaaagacc 1249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttcctcaaacagagggcaatggctacagataccaaaatgtcagtcatgatgtaaaagacc 480
Query: 1250 ctccacaagcattggttgggagtcctgttggtgagattatcaacaacaccaatatatgtg 1309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctccacaagcattggttgggagtcctgttggtgagattatcaacaacaccaatatatgtg 540
Query: 1310 gaatcatcttggatgatggctccacttgtagaagacaaccagttaagggaagaaaaaggt 1369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaatcatcttggatgatggctccacttgtagaagacaaccagttaagggaagaaaaaggt 600
Query: 1370 gccttgagcacaaagggaggagaattcgtgcatcatttcatgtaaaccagaggtaa 1425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gccttgagcacaaagggaggagaattcgtgcatcatttcatgtaaaccagaggtaa 656