Miyakogusa Predicted Gene

Lj2g3v0911620.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v0911620.1 Non Chatacterized Hit- tr|I7D132|I7D132_BRANA
Uncharacterized protein OS=Brassica napus PE=4
SV=1,26.43,5e-18,seg,NULL,CUFF.35633.1
         (1548 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS335600 weakly similar to UniRef100_A7PEB1 Cluster: Ch...  1193   0.0  

>gnl|LJGI|FS335600 weakly similar to UniRef100_A7PEB1 Cluster: Chromosome chr11
           scaffold_13, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (21%)
          Length = 655

 Score = 1193 bits (602), Expect = 0.0
 Identities = 605/606 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagataactggtttggtccctcttgtgggggaaaactatgccctcaagctgaagcag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50  atggagataactggtttggtccctcttgtgggggaaaactatgccctcaagctgaagcag 109

                                                                       
Query: 61  tcaatggaagctcttttggctgaggttcccaaagaatccccggatttttctctcttcatc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 tcaatggaagctcttttggctgaggttcccaaagaatccccggatttttctctcttcatc 169

                                                                       
Query: 121 gatgcattttacgaattgatacaagctaaggttgatccaccctttgaggtgatctgggtc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 170 gatgcattttacgaattgatacaagctaaggttgatccaccctttgaggtgatctaggtc 229

                                                                       
Query: 181 tatgctgcaatcaagtttcgtggccatgaatcggagaaaggtgatgtcttggaccgagta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 tatgctgcaatcaagtttcgtggccatgaatcggagaaaggtgatgtcttggaccgagta 289

                                                                       
Query: 241 ttggctgcaaaaggcttgtttcagctgatatcttcatgttcagcttcggttggtggctca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 ttggctgcaaaaggcttgtttcagctgatatcttcatgttcagcttcggttggtggctca 349

                                                                       
Query: 301 aagagtgttgctttactggcccctgttgtttttgtggcgcatggagtgcttgtggagatt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 aagagtgttgctttactggcccctgttgtttttgtggcgcatggagtgcttgtggagatt 409

                                                                       
Query: 361 ttgggaagggagttgagtttgaagagagagaggaaagcaatgagggaggtgaagtctttg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 ttgggaagggagttgagtttgaagagagagaggaaagcaatgagggaggtgaagtctttg 469

                                                                       
Query: 421 gtagatatggttcttgggtatataagtgtttgctgtagtaagatttctgaggaggaagtt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 gtagatatggttcttgggtatataagtgtttgctgtagtaagatttctgaggaggaagtt 529

                                                                       
Query: 481 gattctgatggtttgaatttgagtttgcctttcacggaattggcgaatgtttgggtggat 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 gattctgatggtttgaatttgagtttgcctttcacggaattggcgaatgtttgggtggat 589

                                                                       
Query: 541 ataaatgatgggtttgaatctttgttgcctcttgtgagcagtgatgtttgtggctggctg 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 ataaatgatgggtttgaatctttgttgcctcttgtgagcagtgatgtttgtggctggctg 649

                 
Query: 601 tgtgct 606
           ||||||
Sbjct: 650 tgtgct 655