Miyakogusa Predicted Gene
- Lj2g3v0910610.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0910610.1 CUFF.35641.1
(723 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64364 similar to UniRef100_A7PEB2 Cluster: Chromosome... 926 0.0
gnl|LJGI|TC68773 similar to UniRef100_Q70Z19 Cluster: Nucleosome... 56 3e-07
gnl|LJGI|TC61547 similar to UniRef100_A7P6S7 Cluster: Chromosome... 54 1e-06
>gnl|LJGI|TC64364 similar to UniRef100_A7PEB2 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (70%)
Length = 1401
Score = 926 bits (467), Expect = 0.0
Identities = 491/498 (98%), Gaps = 7/498 (1%)
Strand = Plus / Plus
Query: 35 tagcagagaatgtttgtaatctgaaaaaggttgaagcggattggatattgcgcatagaca 94
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 tagcagagaatgtttgtaatctgaaaaaggttgaagcggattggatattgcgcatagaca 413
Query: 95 ttgtggaaaaaggagataggcttgagctggaggagcatgactctgagggacaatgcaatt 154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 ttgtggaaaaaggagataggcttgagctggaggagcatgactctgagggacaatgcaatt 473
Query: 155 ctgaatgcaagacgattgagagagcctgtcaggaggttataggatattctgataccgatg 214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 ctgaatgcaagacgattgagagagcctgtcaggaggttataggatattctgataccgatg 533
Query: 215 tggctgaatatttgtataaatctaagtctgatattgattcattgttcaactatctttgca 274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 tggctgaatatttgtataaatctaagtctgatattgattcattgttcaactatctttgca 593
Query: 275 aagacttgactaaagcatgcagtaccaagcctccccctgtccccaaggacaggactcctg 334
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 594 aagacttgactaaagcatgcagtaccaagcctccccctgtccccaa-gacaggactcctg 652
Query: 335 gtgaaccatttgttgcgaagtcttctaaggaggctgaaatggaaaagctactaaaatcaa 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 gtgaaccatttgttgcgaagtcttctaaggaggctgaaatggaaaagctactaaaatcaa 712
Query: 395 tggagggcatgccaggagcacccggcatgaaaatgtactcaagggatgatttaatgaaca 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 tggagggcatgccaggagcacccggcatgaaaatgtactcaagggatgatttaatgaaca 772
Query: 455 tgaagaatttcggtggtgatgaagatgaagacgaggatgaggatgatgatgatcaggcga 514
||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 773 tgaagaatttcggtggt------gatgaagacgaggatgaggatgatgatgatcaggcga 826
Query: 515 gcttcccctcaaaattgg 532
||||||||||||||||||
Sbjct: 827 gcttcccctcaaaattgg 844
Score = 341 bits (172), Expect = 4e-93
Identities = 186/193 (96%)
Strand = Plus / Plus
Query: 531 gggaaaagttttgagagacaaagaaagtggaaaaagtgactggaaacagttgatnnnnnn 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 928 gggaaaagttttgagagacaaagaaagtggaaaaagtgactggaaacagttgataaaaaa 987
Query: 591 nggaattacagacacaagcatgacgctaaagaaacatgcaaacagaatttccaatcatgt 650
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 988 aggaattacagacacaagcatgacgctaaagaaacatgcaaacagaatttccaatcatgt 1047
Query: 651 acaaaagtggtggaagggaaaaaagtcaaccacatcaaagaagagtccgaaggcagggaa 710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1048 acaaaagtggtggaagggaaaaaagtcaaccacatcaaagaagagtccgaaggcagggaa 1107
Query: 711 gtcagaactttag 723
|||||||||||||
Sbjct: 1108 gtcagaactttag 1120
>gnl|LJGI|TC68773 similar to UniRef100_Q70Z19 Cluster: Nucleosome assembly protein
1-like protein 1; n=1; Nicotiana tabacum|Rep: Nucleosome
assembly protein 1-like protein 1 - Nicotiana tabacum
(Common tobacco), partial (43%)
Length = 904
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 468 tggtgatgaagatgaagacgaggatgaggatgatgatgat 507
|||||||||||||||||| || ||||| ||||||||||||
Sbjct: 384 tggtgatgaagatgaagatgaagatgatgatgatgatgat 423
>gnl|LJGI|TC61547 similar to UniRef100_A7P6S7 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (93%)
Length = 1423
Score = 54.0 bits (27), Expect = 1e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 468 tggtgatgaagatgaagacgaggatgaggatgatgatga 506
|||||||||||||||||| || ||||| |||||||||||
Sbjct: 1011 tggtgatgaagatgaagatgaagatgatgatgatgatga 1049