Miyakogusa Predicted Gene

Lj2g3v0906460.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v0906460.1 tr|Q09GS3|Q09GS3_SOYBN Transcription factor MYBJ6
OS=Glycine max PE=2 SV=1,63.24,0,SANT  SWI3, ADA2, N-CoR and TFIIIB''
DNA-bin,SANT/Myb domain; seg,NULL; MYB DNA BINDING /
TRANSCRIPT,CUFF.35617.1
         (837 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO032081 homologue to UniRef100_Q09GS2 Cluster: Transcr...    64   1e-09
gnl|LJGI|TC72932 similar to UniRef100_A7NUE1 Cluster: Chromosome...    58   9e-08
gnl|LJGI|TC68915 homologue to UniRef100_Q2LME0 Cluster: MYB24; n...    52   6e-06

>gnl|LJGI|GO032081 homologue to UniRef100_Q09GS2 Cluster: Transcription factor MYBJ7;
           n=1; Glycine max|Rep: Transcription factor MYBJ7 -
           Glycine max (Soybean), partial (51%)
          Length = 653

 Score = 63.9 bits (32), Expect = 1e-09
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggaagggctccatgttgtgacaagtctagtgtgaaaagagggccatggtctcctgaa 60
           ||||| || |||||||| ||||||||  | | ||| || |||||||||||||||||||||
Sbjct: 204 atgggcagagctccatgctgtgacaaagcaaatgtaaagagagggccatggtctcctgaa 263

                   
Query: 61  gaagatgc 68
           ||||||||
Sbjct: 264 gaagatgc 271


>gnl|LJGI|TC72932 similar to UniRef100_A7NUE1 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (45%)
          Length = 1107

 Score = 58.0 bits (29), Expect = 9e-08
 Identities = 119/149 (79%)
 Strand = Plus / Plus

                                                                       
Query: 37  aaaagagggccatggtctcctgaagaagatgccaccctcaaaagttaccttgagaaacat 96
           |||||||| |||||||| ||||||||||||||||  ||||||  |||| | ||  | |||
Sbjct: 121 aaaagaggcccatggtcgcctgaagaagatgccaaactcaaagcttacatcgatcaccat 180

                                                                       
Query: 97  ggcacaggtggtaattggatagcacttccaccaaaagcaggcctgaaccgttgtgggaag 156
           || || ||||| || ||||| || || |||| |||   |||||| ||  | |||||||| 
Sbjct: 181 ggaaccggtggaaactggattgccctgccacaaaagataggccttaagagatgtgggaaa 240

                                        
Query: 157 agttgtcgtctaagatggctgaactatct 185
           || |||||||| ||||||||||| |||||
Sbjct: 241 agctgtcgtcttagatggctgaattatct 269


>gnl|LJGI|TC68915 homologue to UniRef100_Q2LME0 Cluster: MYB24; n=1; Malus x
           domestica|Rep: MYB24 - Malus domestica (Apple) (Malus
           sylvestris), partial (38%)
          Length = 1263

 Score = 52.0 bits (26), Expect = 6e-06
 Identities = 71/86 (82%)
 Strand = Plus / Plus

                                                                       
Query: 259 ggaagcaggtggtctcttatagctgctcaattccctgggagaacagacaatgatgtgaaa 318
           ||||||||||||||  ||||||||||||| || || || || || ||||||||| | || 
Sbjct: 311 ggaagcaggtggtcaattatagctgctcagttgccaggtaggactgacaatgatatcaag 370

                                     
Query: 319 aatcactggaacaccaagctaaagaa 344
           ||  ||||||||||||| || |||||
Sbjct: 371 aactactggaacaccaaactcaagaa 396