Miyakogusa Predicted Gene
- Lj2g3v0896450.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0896450.1 Non Chatacterized Hit- tr|I1J4G0|I1J4G0_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,86.61,0,NAM,No apical
meristem (NAM) protein; seg,NULL; NAC domain,No apical meristem (NAM)
protein; SUBFAMI,CUFF.35616.1
(1377 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO033890 homologue to UniRef100_A7PEE6 Cluster: Chromos... 404 e-112
gnl|LJGI|GO040430 homologue to UniRef100_A7PEE6 Cluster: Chromos... 115 8e-25
gnl|LJGI|GO029863 similar to UniRef100_A7PJ97 Cluster: Chromosom... 64 2e-09
>gnl|LJGI|GO033890 homologue to UniRef100_A7PEE6 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (35%)
Length = 816
Score = 404 bits (204), Expect = e-112
Identities = 382/440 (86%), Gaps = 6/440 (1%)
Strand = Plus / Plus
Query: 220 atgagatcacaccctttgattgatgagttcatccccactattgaaggagaagatggaatt 279
|||| ||||||||||||||||||||||||||| | ||||||||||||||||||||| |||
Sbjct: 33 atgaaatcacaccctttgattgatgagttcattctcactattgaaggagaagatgggatt 92
Query: 280 tgttacacccatcctgagaaacttccaggagtaacaagggatggcttgagcaagcacttc 339
||||||||||||||||| ||| ||||||||||| |||| ||||| ||||| | ||||||
Sbjct: 93 tgttacacccatcctgaaaaaattccaggagtatcaagagatgggttgagtagacacttc 152
Query: 340 ttccacagaccttcaaaggcatacacaacaggcacaagaaagagaagaaagatccaaaat 399
||||||||||| |||||||||||||||||||| |||||||| || |||||||| |||| |
Sbjct: 153 ttccacagaccatcaaaggcatacacaacaggtacaagaaaaaggagaaagattcaaact 212
Query: 400 gaatgtg---acttg---caaggtggagaaaccagatggcacaagacaggtaagaccagg 453
||||||| ||||| ||||| ||||||||| | |||||||| || || || || |
Sbjct: 213 gaatgtgatcacttgcaacaaggaggagaaacccgttggcacaaaactgggaaaacagga 272
Query: 454 ccagtgatgatgaatgggaaacaaaaaggctgcaagaaaatccttgtcctctacaccaac 513
|||||||| ||||||| ||||||||||| ||||||||||| || ||||| || |||||
Sbjct: 273 ccagtgattgtgaatggaaaacaaaaagggtgcaagaaaattctagtcctgtataccaat 332
Query: 514 tttgggaaaaacagaaagcctgagaagaccaactgggtgatgcatcagtaccatcttggc 573
|||||||| |||||||| || || ||||| |||||||||||||| ||||||||||| ||
Sbjct: 333 tttgggaagaacagaaaaccagaaaagacaaactgggtgatgcaccagtaccatctggga 392
Query: 574 cagcatgaggaggagagagaaggggagcttgtggtgtcaaagatattttatcaaacacag 633
||| |||| || |||| |||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 393 cagaatgaagaagagaaagaaggggagcttgtggtgtcaaagatattttatcagacacag 452
Query: 634 ccaaggcaatgtaactggtc 653
|||||||| ||||| |||||
Sbjct: 453 ccaaggcagtgtaattggtc 472
>gnl|LJGI|GO040430 homologue to UniRef100_A7PEE6 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 584
Score = 115 bits (58), Expect = 8e-25
Identities = 136/162 (83%)
Strand = Plus / Minus
Query: 1195 cagcaacagcatcataagctaggaggaaggtctgcgtctggtttggaggaactcatcatg 1254
|||||||| || |||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 473 cagcaacatgatgataaactaggaggaaggtctgcgtctggtttggaggaactcattatg 414
Query: 1255 gggtgcacttcaagttcaactgatatcaaaccggggtcaactatcacaaacccacaagaa 1314
||||||||||||| | || | || || |||| | || ||||||||||||||
Sbjct: 413 gggtgcacttcaactcttaccaaacagtcacaggagtcatccatggcaaacccacaagaa 354
Query: 1315 gctgaatggttgaagtactcttcttattggccagaccctgac 1356
||||| |||||||||||||||||||| |||||| ||||||||
Sbjct: 353 gctgagtggttgaagtactcttcttactggccacaccctgac 312
>gnl|LJGI|GO029863 similar to UniRef100_A7PJ97 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (62%)
Length = 832
Score = 63.9 bits (32), Expect = 2e-09
Identities = 98/120 (81%)
Strand = Plus / Minus
Query: 526 agaaagcctgagaagaccaactgggtgatgcatcagtaccatcttggccagcatgaggag 585
|||||||||||||| || |||||||| ||||| |||||||| |||||| | |||| ||
Sbjct: 361 agaaagcctgagaaaacaaactgggtcatgcaccagtaccaccttggcaacaatgaagaa 302
Query: 586 gagagagaaggggagcttgtggtgtcaaagatattttatcaaacacagccaaggcaatgt 645
|||| ||||||||| | ||||| || || |||| || ||||||||||| || ||||||
Sbjct: 301 gagaaggaaggggagttggtggtctccaaagtattctaccaaacacagcctagacaatgt 242
Score = 54.0 bits (27), Expect = 2e-06
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 229 caccctttgattgatgagttcatccccactattgaaggagaagatggaatttgttacacc 288
||||| || |||||||||||||| || ||| |||||||||| ||||||| |||| |||
Sbjct: 652 caccccttaattgatgagttcattcctactcttgaaggagagaatggaatctgttgtacc 593
Query: 289 catcctgagaa 299
||||| |||||
Sbjct: 592 catccagagaa 582