Miyakogusa Predicted Gene

Lj2g3v0894330.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v0894330.1 TC80018.path1.1
         (102 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC74870 weakly similar to UniRef100_Q9LRA4 Cluster: T23...   202   3e-52
gnl|LJGI|TC80018                                                      194   6e-50

>gnl|LJGI|TC74870 weakly similar to UniRef100_Q9LRA4 Cluster: T23E23.6; n=1;
            Arabidopsis thaliana|Rep: T23E23.6 - Arabidopsis thaliana
            (Mouse-ear cress), partial (44%)
          Length = 1412

 Score =  202 bits (102), Expect = 3e-52
 Identities = 102/102 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1    atgaagaaagttacttttaggtgcttcagcaaaacccatattaagctgcatcatgacatc 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1226 atgaagaaagttacttttaggtgcttcagcaaaacccatattaagctgcatcatgacatc 1167

                                                      
Query: 61   actagcatcatttccttggttggacaaggttgcctttgttga 102
            ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1166 actagcatcatttccttggttggacaaggttgcctttgttga 1125


>gnl|LJGI|TC80018 
          Length = 396

 Score =  194 bits (98), Expect = 6e-50
 Identities = 101/102 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgaagaaagttacttttaggtgcttcagcaaaacccatattaagctgcatcatgacatc 60
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 atgaagaaagttacttgtaggtgcttcagcaaaacccatattaagctgcatcatgacatc 57

                                                     
Query: 61  actagcatcatttccttggttggacaaggttgcctttgttga 102
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56  actagcatcatttccttggttggacaaggttgcctttgttga 15