Miyakogusa Predicted Gene

Lj2g3v0878970.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v0878970.1 Non Chatacterized Hit- tr|C5YEN3|C5YEN3_SORBI
Putative uncharacterized protein Sb06g026735
(Fragment,47.11,3e-19,Malectin_like,Malectin-like carbohydrate-binding
domain; seg,NULL,CUFF.35589.1
         (563 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC76239 weakly similar to UniRef100_A7U519 Cluster: FER...   848   0.0  

>gnl|LJGI|TC76239 weakly similar to UniRef100_A7U519 Cluster: FERONIA receptor-like
           kinase; n=1; Arabidopsis lyrata|Rep: FERONIA
           receptor-like kinase - Arabidopsis lyrata (Lyre-leaved
           rock-cress), partial (9%)
          Length = 588

 Score =  848 bits (428), Expect = 0.0
 Identities = 437/440 (99%)
 Strand = Plus / Plus

                                                                       
Query: 124 tacactttcccggtgtcccccgggcagatatccctctcactgtacttctaccgttcttcc 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2   tacactttcccggtgtcccccgggcagatatccctctcactgtacttctaccgttcttcc 61

                                                                       
Query: 184 tacggcggcctcaacatctccaacgctctgttcaccgtcaccacgcagtcctccactctg 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62  tacggcggcctcaacatctccaacgctctgttcaccgtcaccacgcagtcctccactctg 121

                                                                       
Query: 244 ttgaacaacttcagccccgccatggaagacacgcagtactatggctgcatcgtgaaggag 303
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 122 ttgaacaacttcagccccgccatggaagacacgcagtactatggccgcatcgtgaaggag 181

                                                                       
Query: 304 tacttgttcaacgtggagggctcaaagctgagcatgacgttcacccctgcttctgcttcc 363
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 182 tacttgttcaacgtggagggctcaaagctgaacatgacgttcacccctgcttctgcttcc 241

                                                                       
Query: 364 aactacgccttcgtgaacgggattgaggtcgtgtcctactctgcagcccctagtcctatt 423
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 242 aactacgccttcgtgaacgggattgaggtcgtgtcctactctgcagcccccagtcctatt 301

                                                                       
Query: 424 cctcaacctcaacaaggtggtaccgatgatgagcctttgaactcaaattcaaaggataag 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 cctcaacctcaacaaggtggtaccgatgatgagcctttgaactcaaattcaaaggataag 361

                                                                       
Query: 484 aagaagataggaaagtttagtgccactgacattgctcttctgctacctacgctggtgctt 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 aagaagataggaaagtttagtgccactgacattgctcttctgctacctacgctggtgctt 421

                               
Query: 544 ctagtccttgttaattagtt 563
           ||||||||||||||||||||
Sbjct: 422 ctagtccttgttaattagtt 441