Miyakogusa Predicted Gene
- Lj2g3v0878960.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0878960.1 tr|I1JMN9|I1JMN9_SOYBN Lysyl-tRNA synthetase
OS=Glycine max GN=Gma.301 PE=3 SV=1,88.31,0,tRNA-synt_2,Aminoacyl-tRNA
synthetase, class II (D/K/N); tRNA_anti,Nucleic acid binding, OB-fold,
tR,CUFF.35588.1
(1776 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61051 similar to UniRef100_A7P095 Cluster: Chromosome... 1415 0.0
gnl|LJGI|TC62752 homologue to UniRef100_A7P095 Cluster: Chromoso... 1100 0.0
gnl|LJGI|TC74813 similar to UniRef100_A7P095 Cluster: Chromosome... 908 0.0
>gnl|LJGI|TC61051 similar to UniRef100_A7P095 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 727
Score = 1415 bits (714), Expect = 0.0
Identities = 714/714 (100%)
Strand = Plus / Plus
Query: 1 atggacgtgccaagactctggaacctgacttcgcgcccactgaagctcttcttacattcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14 atggacgtgccaagactctggaacctgacttcgcgcccactgaagctcttcttacattcc 73
Query: 61 cactcctcttccatatcctctaccgcatttcgtcgaacacctcgcaggcgcgttctccgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 cactcctcttccatatcctctaccgcatttcgtcgaacacctcgcaggcgcgttctccgc 133
Query: 121 tcatcctcttcttcaaccgccaccaccgcctcatcccccggtcaaaaccggcggagctct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 tcatcctcttcttcaaccgccaccaccgcctcatcccccggtcaaaaccggcggagctct 193
Query: 181 gcgtcgtcctcgacgacttcaacttccgatagagaggccattcgagccattcgcttgaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 gcgtcgtcctcgacgacttcaacttccgatagagaggccattcgagccattcgcttgaag 253
Query: 241 aaggttgaagaactgagaagcaaggggctcaatccatatgcttatggatgggacaagact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 aaggttgaagaactgagaagcaaggggctcaatccatatgcttatggatgggacaagact 313
Query: 301 cacagtgctgatcagctgcaagatatatataaagatttaggaaatggtgaggaagcaaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 cacagtgctgatcagctgcaagatatatataaagatttaggaaatggtgaggaagcaaac 373
Query: 361 agtgagaatgatcacgtatctgttgcgggaagaattgttgcaaggagggcgtttggaaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 agtgagaatgatcacgtatctgttgcgggaagaattgttgcaaggagggcgtttggaaag 433
Query: 421 cttgcctttttgacgataagagatgattcagggacaatccagctttattgtgataagaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 cttgcctttttgacgataagagatgattcagggacaatccagctttattgtgataagaag 493
Query: 481 agactcatagatgatcagtttgagcaattgaaggcgcatgttgatattggtgatatactg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 agactcatagatgatcagtttgagcaattgaaggcgcatgttgatattggtgatatactg 553
Query: 541 ggtgcaaaaggaacaataaaacgcacagaaaaaggagaactttctgtgtctgtgctatct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 ggtgcaaaaggaacaataaaacgcacagaaaaaggagaactttctgtgtctgtgctatct 613
Query: 601 tttgcaatccttacgaaatctctgcttccactgcctgacaaatatcatggtttaactgat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 tttgcaatccttacgaaatctctgcttccactgcctgacaaatatcatggtttaactgat 673
Query: 661 acagacatacgttatcgtcagaggtatgtagatatgattgcaaatccagaggta 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 acagacatacgttatcgtcagaggtatgtagatatgattgcaaatccagaggta 727
>gnl|LJGI|TC62752 homologue to UniRef100_A7P095 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (25%)
Length = 708
Score = 1100 bits (555), Expect = 0.0
Identities = 558/559 (99%)
Strand = Plus / Plus
Query: 1218 caaggttgcaaagcaagttactctggatacccttcaaaagaatcttgataacaaggataa 1277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caaggttgcaaagcaagttactctggatacccttcaaaagaatcttgataacaaggataa 60
Query: 1278 agcttccattgaagcatgcaaatctgtcggtcacctcctaaacgaggtttttgagatctt 1337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agcttccattgaagcatgcaaatctgtcggtcacctcctaaacgaggtttttgagatctt 120
Query: 1338 tgtagaaccaaagctcatccaacctacatttgttttagactatccaattgagatatctcc 1397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgtagaaccaaagctcatccaacctacatttgttttagactatccaattgagatatctcc 180
Query: 1398 actggctaaaccacaccgaaggtccacaggtttgactgagagatttgaacttttcatttg 1457
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 actggctaaaccacatcgaaggtccacaggtttgactgagagatttgaacttttcatttg 240
Query: 1458 tggccgtgagctaggcaatgcattctccgaattgactgatcctatagatcagaggggacg 1517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tggccgtgagctaggcaatgcattctccgaattgactgatcctatagatcagaggggacg 300
Query: 1518 cctagaggatcaaattagacagcatgaaaagaagaaagctgctatttcaacaaatggtga 1577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cctagaggatcaaattagacagcatgaaaagaagaaagctgctatttcaacaaatggtga 360
Query: 1578 cccgaaggaaggaatagaaaatgaggatgattcatatgaagtgactcttgatgatgactt 1637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cccgaaggaaggaatagaaaatgaggatgattcatatgaagtgactcttgatgatgactt 420
Query: 1638 cctaacagctttggaatatggaatgcctcctgcttctggcatgggacttggaatcgatag 1697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cctaacagctttggaatatggaatgcctcctgcttctggcatgggacttggaatcgatag 480
Query: 1698 gctcgtgatgcttttgacaaactctcccagcattcgagatgtaatcgccttcccagtact 1757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gctcgtgatgcttttgacaaactctcccagcattcgagatgtaatcgccttcccagtact 540
Query: 1758 caaggttcagctatagtaa 1776
|||||||||||||||||||
Sbjct: 541 caaggttcagctatagtaa 559
>gnl|LJGI|TC74813 similar to UniRef100_A7P095 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 705
Score = 908 bits (458), Expect = 0.0
Identities = 461/462 (99%)
Strand = Plus / Plus
Query: 1 atggacgtgccaagactctggaacctgacttcgcgcccactgaagctcttcttacattcc 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 atggacgtgccacgactctggaacctgacttcgcgcccactgaagctcttcttacattcc 72
Query: 61 cactcctcttccatatcctctaccgcatttcgtcgaacacctcgcaggcgcgttctccgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 cactcctcttccatatcctctaccgcatttcgtcgaacacctcgcaggcgcgttctccgc 132
Query: 121 tcatcctcttcttcaaccgccaccaccgcctcatcccccggtcaaaaccggcggagctct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 tcatcctcttcttcaaccgccaccaccgcctcatcccccggtcaaaaccggcggagctct 192
Query: 181 gcgtcgtcctcgacgacttcaacttccgatagagaggccattcgagccattcgcttgaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 gcgtcgtcctcgacgacttcaacttccgatagagaggccattcgagccattcgcttgaag 252
Query: 241 aaggttgaagaactgagaagcaaggggctcaatccatatgcttatggatgggacaagact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 aaggttgaagaactgagaagcaaggggctcaatccatatgcttatggatgggacaagact 312
Query: 301 cacagtgctgatcagctgcaagatatatataaagatttaggaaatggtgaggaagcaaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 cacagtgctgatcagctgcaagatatatataaagatttaggaaatggtgaggaagcaaac 372
Query: 361 agtgagaatgatcacgtatctgttgcgggaagaattgttgcaaggagggcgtttggaaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 agtgagaatgatcacgtatctgttgcgggaagaattgttgcaaggagggcgtttggaaag 432
Query: 421 cttgcctttttgacgataagagatgattcagggacaatccag 462
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 cttgcctttttgacgataagagatgattcagggacaatccag 474