Miyakogusa Predicted Gene

Lj2g3v0876710.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v0876710.1 tr|I1J4H5|I1J4H5_SOYBN Pectinesterase OS=Glycine
max PE=3 SV=1,85.53,0,Pectinesterase,Pectinesterase, catalytic; no
description,Pectin lyase fold; SUBFAMILY NOT NAMED,NULL,CUFF.35585.1
         (1146 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP070784 homologue to UniRef100_A7PEG1 Cluster: Chromos...   113   2e-24

>gnl|LJGI|BP070784 homologue to UniRef100_A7PEG1 Cluster: Chromosome chr11
           scaffold_13, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (23%)
          Length = 406

 Score =  113 bits (57), Expect = 2e-24
 Identities = 93/105 (88%)
 Strand = Plus / Minus

                                                                       
Query: 648 attcttaggagcacaggacacactttatgatcatttgggcaggcattattataaggattg 707
           |||||| ||||||||||||||||| ||||| ||  |||| |||||||| |||||||||||
Sbjct: 406 attcttgggagcacaggacacactctatgaccaagtgggtaggcattactataaggattg 347

                                                        
Query: 708 ttacattgagggttctgttgatttcatatttggcaatgctctctc 752
            |||||||| || |||||||||||||| ||||| |||||||||||
Sbjct: 346 ctacattgaaggctctgttgatttcatttttggaaatgctctctc 302



 Score = 77.8 bits (39), Expect = 1e-13
 Identities = 93/111 (83%)
 Strand = Plus / Minus

                                                                        
Query: 999  gactgtgttttatggacagtacaaatgcacgggacctggagcaagctttgcagggagagt 1058
            |||||| || |||||||||||| | ||| | ||||| |||||||||||||| || |||||
Sbjct: 291  gactgtattctatggacagtaccagtgctctggaccaggagcaagctttgccggaagagt 232

                                                               
Query: 1059 ctcatgggcaagagaactcactgatgaggaagctggaccttttctttcact 1109
             |||||| | || || ||||||||||||||||||  ||| ||| |||||||
Sbjct: 231  atcatggtcgagggagctcactgatgaggaagctaaaccatttatttcact 181