Miyakogusa Predicted Gene

Lj2g3v0876700.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v0876700.1 tr|Q2NNE0|Q2NNE0_ARATH Calmodulin binding protein
IQD22 OS=Arabidopsis thaliana GN=IQD22 PE=2 SV=1,31.67,2e-18,seg,NULL;
IQD (IQ-DOMAIN), CALMODULIN BINDING,NULL; DUF4005,Domain of unknown
function DUF4005; IQ,I,CUFF.35584.1
         (1266 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC81246 similar to UniRef100_A7PEG2 Cluster: Chromosome...   100   4e-20

>gnl|LJGI|TC81246 similar to UniRef100_A7PEG2 Cluster: Chromosome chr11 scaffold_13,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr11 scaffold_13, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (33%)
          Length = 473

 Score = 99.6 bits (50), Expect = 4e-20
 Identities = 246/310 (79%), Gaps = 6/310 (1%)
 Strand = Plus / Plus

                                                                       
Query: 163 ccacctaacatttctccagcagaagcttcttggttacaatctttccacactgaaagggaa 222
           ||||| |||||||| |||||||| ||| ||||| | ||||| ||| || | |||   || 
Sbjct: 170 ccacccaacatttcaccagcagaggctgcttggctgcaatccttctactccgaatctgag 229

                                                                       
Query: 223 aaggagcagaacaagcacgccattgcggtggctgcagccactgcagcagcagctgatgct 282
           | |||||| | |||||| || |||||||| ||||||||||| |||||||| || ||||||
Sbjct: 230 acggagcaaagcaagcatgctattgcggtcgctgcagccacagcagcagccgcggatgct 289

                                                                       
Query: 283 gccgtggctgctgcacaagctgcagtggcggtggttaggctcacaagtcatggaagggga 342
           || |||||||| || || ||||| | |||||| ||| |||| || || || || || |  
Sbjct: 290 gctgtggctgcagctcaggctgccgcggcggtagttcggctaaccagccacggtagagac 349

                                                                       
Query: 343 accatgtttggtggtggtggtcatgagaagatgtgtgctgctgttaagattcaaacattg 402
           |||||||| ||||||||   |||    |||  ||  |||||||| |||||||||||| | 
Sbjct: 350 accatgttcggtggtggacatca----aag--gttggctgctgtcaagattcaaacagtt 403

                                                                       
Query: 403 ttcaggggatacctggcaaagaaagcactgagagccttaaaaggattggtgaagttacaa 462
           || || |||||| | |||| ||| ||| |||||||||||||||||||||| ||||| || 
Sbjct: 404 tttagaggatacttagcaaggaaggcattgagagccttaaaaggattggtcaagttgcag 463

                     
Query: 463 gcacttgtga 472
           ||||||||||
Sbjct: 464 gcacttgtga 473