Miyakogusa Predicted Gene
- Lj2g3v0855220.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0855220.1 tr|A9TN68|A9TN68_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,25.43,1e-17,Senescence,Senescence/spartin-associated;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.35559.1
(1140 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81526 similar to UniRef100_A7PEH2 Cluster: Chromosome... 2141 0.0
gnl|LJGI|TC66800 similar to UniRef100_A7PEH2 Cluster: Chromosome... 250 2e-65
gnl|LJGI|TC78442 similar to UniRef100_A7PEH2 Cluster: Chromosome... 232 4e-60
>gnl|LJGI|TC81526 similar to UniRef100_A7PEH2 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (68%)
Length = 1252
Score = 2141 bits (1080), Expect = 0.0
Identities = 1092/1096 (99%)
Strand = Plus / Plus
Query: 45 gatgagaacctccacgcttgttcctattgctgaatactcaaaacccaagaacctgatcag 104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gatgagaacctccacgcttgttcctattgctgaatactcaaaacccaagaacctgatcag 60
Query: 105 acaagaagttctgatccaaattccaggatgcagagtttacctgatggatgaaggacaagc 164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acaagaagttctgatccaaattccaggatgcagagtttacctgatggatgaaggacaagc 120
Query: 165 tgttgaactggctcaaggccagttcatgatcatcaaagtcatggatgataacgtatcact 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgttgaactggctcaaggccagttcatgatcatcaaagtcatggatgataacgtatcact 180
Query: 225 tgccacaatcatcaaagtagggaacggtgtccagtggccactgacaaaagatgagccggt 284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgccacaatcatcaaagtagggaacggtgtccagtggccactgacaaaagatgagccggt 240
Query: 285 ggtgaaggtggatactctgcattacctgttcacgttgcctgtgaaagatggaggatcaga 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggtgaaggtggatactctgcattacctgttcacgttgcctgtgaaagatggaggatcaga 300
Query: 345 gcctctgagctatggtgtgacgtttccagagcagtgttatgggagcatggggttgctgga 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gcctctgagctatggtgtgacgtttccagagcagtgttatgggagcatggggttgctgga 360
Query: 405 atcttttctgaaggatcactcttgcttttctgatttgaaaacagggaagaaaggtggtct 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atcttttctgaaggatcactcttgcttttctgatttgaaaacagggaagaaaggtggtct 420
Query: 465 tgattgggagcagtttgctcccagggttgaagattacaatcactttctggctaaggcgat 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgattgggagcagtttgctcccagggttgaagattacaatcactttctggctaaggcgat 480
Query: 525 tgctggagggactggtcagattgttaagggtatcttcatgtgcagtaatgcttacactaa 584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgctggagggactggtcagattgttaagggtatcttcatgtgcagtaatgcttacactaa 540
Query: 585 ccaggtccaaagtggagggcaaacgatcctaactgataacaaaaataatggcttggttag 644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ccaggtccaaagtggagggcaaacgatcctaactgataacaaaaataatggcttggttag 600
Query: 645 acaaagtgtgagcaacaacaaaactgctgatgccacaaagaagaatgcgatgaacgaaaa 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 acaaagtgtgagcaacaacaaaactgctgatgccacaaagaagaatgcgatgaacgaaaa 660
Query: 705 cctcaaacgtgtgagacagctaacaactatgacagaaaagttatccaaatctttgcttga 764
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 661 tctcaaacgtgtgagacagctaacaactatgacagaaaagttatctaaatctttgcttga 720
Query: 765 tggtgttggaataatgagtggatcagtgatggctcctgtgcttaaatctcaaccaggaca 824
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 721 tggtgttggaataatgagtggatcagtgatggctcctgtgcttaagtctcaaccaggaca 780
Query: 825 agcattcctgaagatgctccctggagaggtgcttttggcttcccttgatgcagtcaacaa 884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 agcattcctgaagatgctccctggagaggtgcttttggcttcccttgatgcagtcaacaa 840
Query: 885 ggtgtttgaagcaactgaagctgctcaaaagcaatccctttctgccacctcccaagctgc 944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 ggtgtttgaagcaactgaagctgctcaaaagcaatccctttctgccacctcccaagctgc 900
Query: 945 caccagaatggtttctaacagatatggggaagaagcaggggaggccacagaacatgtgtt 1004
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 901 caccagaatggtttctaacagatatggggaagaagcaggggaagccacagaacatgtgtt 960
Query: 1005 tgcaacagcaggacatgctgcaaacactgcttggaatgtttctaagatacggaaggccat 1064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 tgcaacagcaggacatgctgcaaacactgcttggaatgtttctaagatacggaaggccat 1020
Query: 1065 caatccagtcactccagcaagcactgcaggaggagcactgagaaattctatcaagaatag 1124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 caatccagtcactccagcaagcactgcaggaggagcactgagaaattctatcaagaatag 1080
Query: 1125 aaatgttggataataa 1140
||||||||||||||||
Sbjct: 1081 aaatgttggataataa 1096
>gnl|LJGI|TC66800 similar to UniRef100_A7PEH2 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (44%)
Length = 711
Score = 250 bits (126), Expect = 2e-65
Identities = 309/370 (83%)
Strand = Plus / Plus
Query: 703 aacctcaaacgtgtgagacagctaacaactatgacagaaaagttatccaaatctttgctt 762
|||||||||||||||||| |||| | | ||||||||||| || |||||||||||||
Sbjct: 141 aacctcaaacgtgtgagaaagctgtccaagatgacagaaaaattgagcaaatctttgctt 200
Query: 763 gatggtgttggaataatgagtggatcagtgatggctcctgtgcttaaatctcaaccagga 822
|||||||||| ||| | ||||| ||||||||||| || ||| ||||||| ||||||||
Sbjct: 201 aatggtgttggcatagttagtggttcagtgatggccccagtggttaaatccaaaccagga 260
Query: 823 caagcattcctgaagatgctccctggagaggtgcttttggcttcccttgatgcagtcaac 882
| |||||||||| ||||| |||||||||||| | ||||||||| |||||||||| |||
Sbjct: 261 aaggcattcctgagaatgcttcctggagaggtgttgttggcttcctttgatgcagttaac 320
Query: 883 aaggtgtttgaagcaactgaagctgctcaaaagcaatccctttctgccacctcccaagct 942
||||| |||| ||| ||||||||||| |||| ||| | |||| |||||||||||| |||
Sbjct: 321 aaggttcttgatgcagctgaagctgctgaaaaacaaactctttttgccacctcccaggct 380
Query: 943 gccaccagaatggtttctaacagatatggggaagaagcaggggaggccacagaacatgtg 1002
| |||||||||| |||||||| | ||||||| | || ||||| || || || |||||
Sbjct: 381 acatccagaatggtctctaacaggtttggggaaaatgctggggaagctactgagcatgtc 440
Query: 1003 tttgcaacagcaggacatgctgcaaacactgcttggaatgtttctaagatacggaaggcc 1062
|||||||| || ||||||||||| ||||||||||||||||| | ||||||||| |||||
Sbjct: 441 tttgcaactgcgggacatgctgctaacactgcttggaatgtctttaagatacgaaaggct 500
Query: 1063 atcaatccag 1072
|||| |||||
Sbjct: 501 atcactccag 510
>gnl|LJGI|TC78442 similar to UniRef100_A7PEH2 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (68%)
Length = 1254
Score = 232 bits (117), Expect = 4e-60
Identities = 413/512 (80%), Gaps = 6/512 (1%)
Strand = Plus / Plus
Query: 105 acaagaagttctgatccaaattccaggatgcagagtttacctgatggatgaaggacaagc 164
||||||||||||||| || || |||||||||| |||| | |||||||||| ||| ||||
Sbjct: 84 acaagaagttctgatacacataccaggatgcaaagttcatctgatggatgcaggggaagc 143
Query: 165 tgttgaactggctcaaggccagttcatgatcatcaaagtcatggatgataacgtatcact 224
| |||||||||||||||| |||||||||||||||||| | ||||||| || || || ||
Sbjct: 144 tcttgaactggctcaaggtcagttcatgatcatcaaaaccttggatgagaatgtgtctct 203
Query: 225 tgccacaatcatcaaagtagggaacggtgtccagtggccactgacaaaagatgagccggt 284
|| |||||||| |||||||| | | | | ||| ||| |||||||||||||||| ||
Sbjct: 204 agctacaatcataaaagtaggagatgatcttcagaggcgcttgacaaaagatgagccagt 263
Query: 285 ggtgaaggtggatactctgcattacctgttcacgttgcctgtgaaagatggaggatcaga 344
|||||| | || |||| |||||||||||| | ||||||||||||||||| | |
Sbjct: 264 agtgaagcttgaccctctccattacctgttctccttgcctgtgaaagatggtg------a 317
Query: 345 gcctctgagctatggtgtgacgtttccagagcagtgttatgggagcatggggttgctgga 404
|||||| |||||||| || || ||| |||| | ||| ||| || || | || |||||
Sbjct: 318 gcctcttagctatggagttaccttttcagaaaatggttttggaagtttgagttttctgga 377
Query: 405 atcttttctgaaggatcactcttgcttttctgatttgaaaacagggaagaaaggtggtct 464
|| ||||||||||| | | ||||||||||| ||||| | | ||||| | |||
Sbjct: 378 ttcgtttctgaaggagcgatgttgcttttctgggttgaatttaagtaagaagaataatct 437
Query: 465 tgattgggagcagtttgctcccagggttgaagattacaatcactttctggctaaggcgat 524
||||||| || |||||||||| |||||||||||||||||||| |||||||| || || ||
Sbjct: 438 tgattggaaggagtttgctccgagggttgaagattacaatcattttctggccaaagcaat 497
Query: 525 tgctggagggactggtcagattgttaagggtatcttcatgtgcagtaatgcttacactaa 584
||| ||||| |||||||||||||| |||||||||||||| ||||| ||||||||||| ||
Sbjct: 498 tgcaggaggaactggtcagattgtgaagggtatcttcatctgcagcaatgcttacaccaa 557
Query: 585 ccaggtccaaagtggagggcaaacgatcctaa 616
| ||||||| || ||||| ||||||||||||
Sbjct: 558 caaggtccagagaggaggagaaacgatcctaa 589
Score = 127 bits (64), Expect = 2e-28
Identities = 145/172 (84%)
Strand = Plus / Plus
Query: 901 gaagctgctcaaaagcaatccctttctgccacctcccaagctgccaccagaatggtttct 960
||||||||| |||| ||| | ||||||||||||||||| ||| | |||||||||| |||
Sbjct: 713 gaagctgctgaaaaacaaactctttctgccacctcccaggctacatccagaatggtctct 772
Query: 961 aacagatatggggaagaagcaggggaggccacagaacatgtgtttgcaacagcaggacat 1020
||||| | ||||||| | || ||||| || || || ||||| |||||||| || ||||||
Sbjct: 773 aacaggtttggggaaaatgctggggaagctactgagcatgtctttgcaactgcgggacat 832
Query: 1021 gctgcaaacactgcttggaatgtttctaagatacggaaggccatcaatccag 1072
||||| ||||||||||||||||| | ||||||||| ||||| |||| |||||
Sbjct: 833 gctgctaacactgcttggaatgtctttaagatacgaaaggctatcactccag 884