Miyakogusa Predicted Gene
- Lj2g3v0824620.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0824620.1 tr|I1L4K9|I1L4K9_SOYBN Elongation factor Ts
OS=Glycine max GN=Gma.1666 PE=3 SV=1,74.63,0,no description,Nucleic
acid-binding, OB-fold; no description,NULL; no description,Translation
elonga,CUFF.35520.1
(3321 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV414055 similar to UniRef100_Q0WWF9 Cluster: Elongatio... 854 0.0
gnl|LJGI|BP075857 homologue to UniRef100_A7PEK9 Cluster: Chromos... 630 e-179
gnl|LJGI|AV411598 similar to UniRef100_Q0WWF9 Cluster: Elongatio... 630 e-179
gnl|LJGI|TC73062 similar to UniRef100_Q0WWF9 Cluster: Elongation... 511 e-144
>gnl|LJGI|AV414055 similar to UniRef100_Q0WWF9 Cluster: Elongation factor Ts; n=1;
Arabidopsis thaliana|Rep: Elongation factor Ts -
Arabidopsis thaliana (Mouse-ear cress), partial (23%)
Length = 431
Score = 854 bits (431), Expect = 0.0
Identities = 431/431 (100%)
Strand = Plus / Plus
Query: 2181 cagaatcggtgttctggtggaactaaactgcgagacagatttcgtctcccgaggtgacat 2240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagaatcggtgttctggtggaactaaactgcgagacagatttcgtctcccgaggtgacat 60
Query: 2241 ttttaaggagcttgttgatgatatagccatgcaagtggctgcatgccctcaagtagagta 2300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttttaaggagcttgttgatgatatagccatgcaagtggctgcatgccctcaagtagagta 120
Query: 2301 cctcgttgctgaagatgttcctgaggatattgtgaacaaagaaaaagagatagaaatgca 2360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cctcgttgctgaagatgttcctgaggatattgtgaacaaagaaaaagagatagaaatgca 180
Query: 2361 gaaagaggatcttttgtcaaaaccagagcagattagatcaaaaatcgttgaaggccggat 2420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaaagaggatcttttgtcaaaaccagagcagattagatcaaaaatcgttgaaggccggat 240
Query: 2421 aaggaaaagacttgaggagctagcattgcttgagcagcccttcattaagaatgataaagt 2480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaggaaaagacttgaggagctagcattgcttgagcagcccttcattaagaatgataaagt 300
Query: 2481 gccagtgaaggactgggtcaagcagacaattgcaactattggagaaaatattaaagtgaa 2540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gccagtgaaggactgggtcaagcagacaattgcaactattggagaaaatattaaagtgaa 360
Query: 2541 gaggtttgtgaggttcaacctcggagagggtttagagaagaaaagccaggattttgctgc 2600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaggtttgtgaggttcaacctcggagagggtttagagaagaaaagccaggattttgctgc 420
Query: 2601 tgaagtggctg 2611
|||||||||||
Sbjct: 421 tgaagtggctg 431
>gnl|LJGI|BP075857 homologue to UniRef100_A7PEK9 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (9%)
Length = 463
Score = 630 bits (318), Expect = e-179
Identities = 441/465 (94%), Gaps = 13/465 (2%)
Strand = Plus / Minus
Query: 95 gtatgtcagggaac-tctgtaaaacctggatcatcaacttggagatttctctttccttca 153
|||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 463 gtatgtcagggaacctctgtaaa-cctggatcatcaact-ggagatttctctttccttca 406
Query: 154 tttcatgccaatggagtg-ttgccacagaacaaaaggatatgct-ctttccataaga-aa 210
||||||||| |||||| | |||||||||||| |||||||||||| |||||||||||| ||
Sbjct: 405 tttcatgcccatggagaggttgccacagaaccaaaggatatgctactttccataagacaa 346
Query: 211 tctagaacctccatatcagccactgaaacagaagtagcagtggaggaaccaggttcaacg 270
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 345 tctagaacctccatatcagccactgacacagaagtagcagtggaggaaccaggttcaacg 286
Query: 271 gttgcagatga-agctt-ccggtgaa-gttccttcggatgaagttggaacaattgaagat 327
||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 285 gttgcagatgacagcttaccggtgaacgttccttcggatgaagttggaacaattgaagat 226
Query: 328 tcatctg-cgaagtctgatgccaac-ccagccgcagctagggccagacgctcaagaccc- 384
||||||| ||||||||||||||||| || |||||||||||||||||||||| ||||||
Sbjct: 225 tcatctgtcgaagtctgatgccaacacccgccgcagctagggccagacgctncagacccc 166
Query: 385 gcaaggaaaagtgatatgcctcctgtaaaaaatgaggacttggttcctggggcaactttt 444
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 165 gcaaggaaaagtgatatgcctcctgtaaaaaatgaggacttggttcctggggcaacttct 106
Query: 445 actgggaaagtaaagtctatccagccatttggtgccttcg-ttgatttcggagctttcac 503
|||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||
Sbjct: 105 actgggaaagtaaagtctatccagccctttgctgccttcgcttgatttcggagctttcac 46
Query: 504 agatgggcttgttcacgtttcaatgttgagtgatagctatgtaaa 548
||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 45 agatgggcttgttcacgtttccatgttgagtgatagctatgtaaa 1
>gnl|LJGI|AV411598 similar to UniRef100_Q0WWF9 Cluster: Elongation factor Ts; n=1;
Arabidopsis thaliana|Rep: Elongation factor Ts -
Arabidopsis thaliana (Mouse-ear cress), partial (7%)
Length = 318
Score = 630 bits (318), Expect = e-179
Identities = 318/318 (100%)
Strand = Plus / Plus
Query: 1803 ctccattgatgacctcaaagaagtgcaaaacgaaatagctaccacagagaatgaaaatat 1862
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctccattgatgacctcaaagaagtgcaaaacgaaatagctaccacagagaatgaaaatat 60
Query: 1863 tgttacctcacaagttgaagataaagaagtttcagtttcatctgaggaaagtaacagctt 1922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgttacctcacaagttgaagataaagaagtttcagtttcatctgaggaaagtaacagctt 120
Query: 1923 atctaattctggtggagaaaatggccttcctgcttcagatcaaagctcgagcgaagcaac 1982
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atctaattctggtggagaaaatggccttcctgcttcagatcaaagctcgagcgaagcaac 180
Query: 1983 tatatcacctgcacttgtgaagcatctgcgggaagaaacaggagctggaatgatggactg 2042
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tatatcacctgcacttgtgaagcatctgcgggaagaaacaggagctggaatgatggactg 240
Query: 2043 caaaaaggctctatcagagactggaggagacattattaaagcacaagagtaccttaggac 2102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 caaaaaggctctatcagagactggaggagacattattaaagcacaagagtaccttaggac 300
Query: 2103 aaaaggcttatcgagtgc 2120
||||||||||||||||||
Sbjct: 301 aaaaggcttatcgagtgc 318
>gnl|LJGI|TC73062 similar to UniRef100_Q0WWF9 Cluster: Elongation factor Ts; n=1;
Arabidopsis thaliana|Rep: Elongation factor Ts -
Arabidopsis thaliana (Mouse-ear cress), partial (12%)
Length = 517
Score = 511 bits (258), Expect = e-144
Identities = 258/258 (100%)
Strand = Plus / Plus
Query: 3064 gaaaaagaaatcgagatgcagagggaggaccttctttccaagcctgagaacatcagagaa 3123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaaaaagaaatcgagatgcagagggaggaccttctttccaagcctgagaacatcagagaa 60
Query: 3124 aaaattgtggagggaagggtttcaaagaggctcggggagcttgcgcttctagagcagcct 3183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaaattgtggagggaagggtttcaaagaggctcggggagcttgcgcttctagagcagcct 120
Query: 3184 tttatcaaggatgacagtgttttagtgaaagacttggtgaagcaaagcattgcagccatt 3243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tttatcaaggatgacagtgttttagtgaaagacttggtgaagcaaagcattgcagccatt 180
Query: 3244 ggagagaacattaaagtgcggcgttttgttaggttcactctaggggagacagctgaaaaa 3303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggagagaacattaaagtgcggcgttttgttaggttcactctaggggagacagctgaaaaa 240
Query: 3304 gaaacaataacagcataa 3321
||||||||||||||||||
Sbjct: 241 gaaacaataacagcataa 258