Miyakogusa Predicted Gene
- Lj2g3v0813500.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0813500.1 Non Chatacterized Hit- tr|I1K5W7|I1K5W7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,73.2,0,HLH,
helix-loop-helix DNA-binding domain,Helix-loop-helix domain; no
description,Helix-loop-helix do,CUFF.35503.1
(1011 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69840 similar to UniRef100_A7PEL5 Cluster: Chromosome... 1590 0.0
gnl|LJGI|BP071722 homologue to UniRef100_A7PEL5 Cluster: Chromos... 119 4e-26
gnl|LJGI|BP080854 homologue to UniRef100_A7PEL5 Cluster: Chromos... 115 6e-25
>gnl|LJGI|TC69840 similar to UniRef100_A7PEL5 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (73%)
Length = 1566
Score = 1590 bits (802), Expect = 0.0
Identities = 815/818 (99%), Gaps = 1/818 (0%)
Strand = Plus / Plus
Query: 194 ggccagaaaatcaagaggttcctgagtcatggagccagctactcatgagtggagttgtgg 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 ggccagaaaatcaagaggttcctgagtcatggagccagctactcatgagtggagttgtgg 547
Query: 254 ctgaagaagataagggtgctatggcccagtttcagaatcaaatgctaactcaggctccaa 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 ctgaagaagataagggtgctatggcccagtttcagaatcaaatgctaactcaggctccaa 607
Query: 314 atgcttcctttattgatgttaaacaagaaaactcgggaaacagctatgtgtatgggcatg 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 atgcttcctttattgatgttaaacaagaaaactcgggaaacagctatgtgtatgggcatg 667
Query: 374 gaaacgaagaacttcactcagcaaagtcttgttggtctccaaaatcctgtgtgacaagtt 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 gaaacgaagaacttcactcagcaaagtcttgttggtctccaaaatcctgtgtgacaagtt 727
Query: 434 ttagtagcaacatgctggacttctctaacaataatagggatcatgtgaggcttcatccac 493
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 ttagtagcgacatgctggacttctctaacaataatagggatcatgtgaggcttcatccac 787
Query: 494 caccagatctatcttctgagtgcaacagcacccctgcatctggtggggcaatgaagaaag 553
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 788 caccagatctatcttctgagtgcaacagcaccc-tgcatctggtggggcaatgaagaaag 846
Query: 554 ctagggttcaaccctctacatctcaacctaccttcaaggttaggaaggagaagttaggtg 613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 ctagggttcaaccctctacatctcaacctaccttcaaggttaggaaggagaagttaggtg 906
Query: 614 acagaattactgcccttcatcagttagtttccccatttgggaagactgacacagcctctg 673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 907 acagaattactgcccttcatcagttagtttccccatttgggaagactgacacagcctctg 966
Query: 674 tcttgttagaagctattgggtatatcagattccttcagagtcaaattgaggcccttagtt 733
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 967 tcttgttagaagctattgggtatatcagattccttcagagtcaaattgaggcccttagct 1026
Query: 734 taccatacttgagcagtggatcaggaagcacgaggcagcaacaacaacagcatgtccaag 793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1027 taccatacttgagcagtggatcaggaagcacgaggcagcaacaacaacagcatgtccaag 1086
Query: 794 gagaaaagaatagtatatttcctgaagacccaggtcagctgctaaatgaaaacggcttga 853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1087 gagaaaagaatagtatatttcctgaagacccaggtcagctgctaaatgaaaacggcttga 1146
Query: 854 agaggaaagccactgaagggcaggattctcaagaagagtcaaagaaggacctgaggagca 913
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1147 agaggaaagccactgaagggcaggattctcaagaagagtcaaagaaggacctgaggagca 1206
Query: 914 gaggtttgtgtctggttccagtgtcatgcacactgcaagttgggagtgacaatggagcag 973
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1207 gaggtttgtgtctggttccagtgtcatgcacactgcaagttgggagtgacaatggagcag 1266
Query: 974 actattgggctcctgcctttggagggggctttcagtaa 1011
||||||||||||||||||||||||||||||||||||||
Sbjct: 1267 actattgggctcctgcctttggagggggctttcagtaa 1304
Score = 222 bits (112), Expect = 3e-57
Identities = 112/112 (100%)
Strand = Plus / Plus
Query: 1 atgaatagaggtgttcttcaaagctccccagtgcaacaaatgatggctgggaaccctaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 atgaatagaggtgttcttcaaagctccccagtgcaacaaatgatggctgggaaccctaac 354
Query: 61 tggtggaatatcaatatcaatagcatgaggccaccatctccacaaccacaag 112
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 tggtggaatatcaatatcaatagcatgaggccaccatctccacaaccacaag 406
>gnl|LJGI|BP071722 homologue to UniRef100_A7PEL5 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 388
Score = 119 bits (60), Expect = 4e-26
Identities = 60/60 (100%)
Strand = Plus / Minus
Query: 952 gttgggagtgacaatggagcagactattgggctcctgcctttggagggggctttcagtaa 1011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gttgggagtgacaatggagcagactattgggctcctgcctttggagggggctttcagtaa 329
>gnl|LJGI|BP080854 homologue to UniRef100_A7PEL5 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 360
Score = 115 bits (58), Expect = 6e-25
Identities = 76/82 (92%)
Strand = Plus / Minus
Query: 919 ttgtgtctggttccagtgtcatgcacactgcaagttgggagtgacaatggagcagactat 978
||||||||||||||||| ||||||||||| |||||||| |||||||||||||| || |||
Sbjct: 356 ttgtgtctggttccagtttcatgcacactccaagttggaagtgacaatggagctgattat 297
Query: 979 tgggctcctgcctttggagggg 1000
||||||||||| ||||||||||
Sbjct: 296 tgggctcctgcttttggagggg 275